Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01944 ATGGGAAGTCAGAGATATATGGTTGCCGCCGCAGCGACAGTTAGCTTTTGTGTACTTTTGGTTCTTCTTGTTGTAGGAACAGTTAACTTTATAGATAAGAAGGGAACACAAGGTGTTATTAGACAATTGCTTGATCCAGCATCTGAATTGCTAGATGACAACACGGCAAAGGTACTATTAACAAAAAATGTAATTCATTTAAATAAAGAGGCAGAAGATCTCCATCTATGCGTTCGACAAGAATTGCCTGTTAACTTCAATACAATTGGTTCAGATATTCGACCATTAACACAAGCAGACATAAAAAATTTGATTAATCTTTGCCATTATCATTTCAAGGAAAAGTGCGTCTATTGTTTGAGAAAAAATAATCTTCTATTACTGCCATCGAGGGAAGATGATGATGATTCCAAGATTTGGCATGCTGCATATAGGGGACTGCATTTTTCTGGATCTAGTGCTTCCAGACAAAACTCGGGTCGAGTTTTGCTTCAGCAGATATCAGAAGCACCTAGTCCAGGACCTGCTGTTGGATCACCAACACCAAGTCTTGCACCATCCCCTGGACCCAATTTAGCACCCTCATCCGGACCTAGTCCAGCACCATCCCCTGGACCTGGTCTGGCCCCATCTTCTGCTCCGGTACCTGTTGATTCTAGACCTCTGCATCCTCCTTTGTCACCATTTTTTCCTAAACTGACACCACCAACAACATCAAATGCAGATGTTTCTGCTCCTCCATCATCGGACGCTAATAAAACCGAAGATAAGCATAGTAATAAGAAAACAGTTGTTATTGCTGTAGTTATAACTGCACTGGTGACATTGATAGGAGCAGCACTGCTCTTTATGTTCTGTGGTCGGTTTTCGAAGATTGGCCAAGGTAGAAAAAATGATGAGAGGCCACTTCTCAGCTTGAGCATGAGTGACTACTCTGTTGGTCCTTCCAGTTATGGATTTGGAAATTCAATGAAAGGGGAGAAACTTGGGTTCCAATCATCAAGTAATAATTTGGTTGACAACAAGAAGCCCCAGGTTCAAGAAAGTCAATCAATAGGAGCTTTTAGTGCTGCTTTGGGATCACCATTTGAAGTAAAAACTCATTCCCAGTGGACAGGAACCATGCCTTCTGGAATGCCTCCTTTAAAGCCTCCACCTGGCAGGCTGAATCCTCTCCCCCCTGAGCCTCCTTCGTTTAGGCCTTCCGGTAATGCTGCTGCTGCCGCTGCCCCTGCCCCTGCCCCTGCCCTGGCTACTCATGGACCACAACAGGTTGGTGTTGGTGGTGCTCCACGTCCTGGACCTCCACCACCACCACACCCAGCACCAGTTGGTGCCCAACATTCTCCTCCCTTCCCACCACCCCCAGCATTGGCTGCTGCCAGAGCTCATCCTCCACCACCACCTCCTGCACCAGTTGGGGCCAGACCTAGTCCTCCACCACCACTGCCCCCTGCATCAACAGGTGCGAAACCTAGTCCTCCTCCACCGCCCCCAGCTCCAGCTGGTGCCAAACCTGGTCCTCGCCCTCCGCCACCTCCGAAGGGTGGTATACCTCCTCCTCGCCCACCTCCAATCGGGGCTAGCAAACCAAAAGCTACAGAGAACGTTGAAGCTGGCACAAGTGAAGCTGATGCTCCTAAAGCCAAGCTAAAGCCATTTTTCTGGGATAAGGTTCAAGCCAACTCTGATCAATCAATGGTTTGGAATCAAATCAAGTCTGGATCATTCCAGTTTAATGAGGAGATGATAGAAACACTTTTTGGTTATAACGCTGTGGATAAAAACAATGACCCTTCACCTCAGTATATCCAGATCATTGACAAGAAGAAAGCACAGAATTTATTAATTCTGTTGCGAGCATTGAACGTGACAATGGAAGAAGTATGTGATGCACTTTATGAAGGAAATGAGCTGCCTGCTGAGTTCCTCCAAACCTTGCTGAAGATGGCACCGACGACTGATGAACAACTTAAGCTTAGACTTTTTACTGGTGAGCTATCTCAACTTGGCCCTGCTGATCAGTTCTTGAAAGCGATGGTTGACATTCCATTTGCTTTCAAGCGAATGGAAGCACTTCTTTTCATGAGTACACTTAAAGAGGAGCTCAATTCTACTATCGAGTCTTTTGCAGTTCTAGAGGTTGCTTGTAAGGAACTAAGAAACAGCCGGCTGTTCCTCAAGCTTCTTGAAGCTGTTCTCAAAACTGGCAACCGTATGAATGATGGAACATTCCGTGGTGGTGCACAAGCATTTAAGCTTGATACACTCCTGAAACTATCTGATGTAAAAGGAACAGATGGCAAGACCACACTCTTACACTTTGTGGTTCAAGAGATTATCCGTTCTGAAGGCATAAAAGCTGCCAGGCTGGCAAATGTGAGTGATCTTAAAGATAGTGAAACTGGAGATCGCTACCGTGACATTGGCCTTCAGGTGGTTTCGCACTTGAGTAGCGAACTTGAGAATGTCAAGAGAGCAGCAATTCTAGATGCTGACACCTTAACTGGAACTACTGCCAAACTTGGCCATGGTCTCATGAAAACCAAAGAGTTGTTAAACAAAGATCTGAAGAATGTGGAGGAAGATAGAGGGTTTAGTGACACAATTAGACGTTTCGTGCAGAATGCTGAGACTGATGTCGTGAGACTTCTGGAAGAAGAGAAGAGAGTCATGGCTCTGGTAAAGAGCACTGGTGATTACTTTCATGGGAAGGCCGGCAAGGACGAAGGCTTACGGTTGTTTGTAATAGTAAGAGACTTCTTAATAATGGTGGACAAGGCATGCAAGCAGGTGAGAGATGCACAGAAGAAGCCTGCGAAATCTCAAAAACAAGAGACATCTCAAGGATCATCTTCCTCAGAGACTCGTCCGCCACCTTCTGATTTTCGTCAGCGGCTCTTTCCAGCAATTGCTGAAAGGAGGATAGGTGACAGTAGTTCGGATGAAGAGAGTCCATAG 2961 0.458 MGSQRYMVAAAATVSFCVLLVLLVVGTVNFIDKKGTQGVIRQLLDPASELLDDNTAKVLLTKNVIHLNKEAEDLHLCVRQELPVNFNTIGSDIRPLTQADIKNLINLCHYHFKEKCVYCLRKNNLLLLPSREDDDDSKIWHAAYRGLHFSGSSASRQNSGRVLLQQISEAPSPGPAVGSPTPSLAPSPGPNLAPSSGPSPAPSPGPGLAPSSAPVPVDSRPLHPPLSPFFPKLTPPTTSNADVSAPPSSDANKTEDKHSNKKTVVIAVVITALVTLIGAALLFMFCGRFSKIGQGRKNDERPLLSLSMSDYSVGPSSYGFGNSMKGEKLGFQSSSNNLVDNKKPQVQESQSIGAFSAALGSPFEVKTHSQWTGTMPSGMPPLKPPPGRLNPLPPEPPSFRPSGNAAAAAAPAPAPALATHGPQQVGVGGAPRPGPPPPPHPAPVGAQHSPPFPPPPALAAARAHPPPPPPAPVGARPSPPPPLPPASTGAKPSPPPPPPAPAGAKPGPRPPPPPKGGIPPPRPPPIGASKPKATENVEAGTSEADAPKAKLKPFFWDKVQANSDQSMVWNQIKSGSFQFNEEMIETLFGYNAVDKNNDPSPQYIQIIDKKKAQNLLILLRALNVTMEEVCDALYEGNELPAEFLQTLLKMAPTTDEQLKLRLFTGELSQLGPADQFLKAMVDIPFAFKRMEALLFMSTLKEELNSTIESFAVLEVACKELRNSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGIKAARLANVSDLKDSETGDRYRDIGLQVVSHLSSELENVKRAAILDADTLTGTTAKLGHGLMKTKELLNKDLKNVEEDRGFSDTIRRFVQNAETDVVRLLEEEKRVMALVKSTGDYFHGKAGKDEGLRLFVIVRDFLIMVDKACKQVRDAQKKPAKSQKQETSQGSSSSETRPPPSDFRQRLFPAIAERRIGDSSSDEESP 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01944 986 MobiDBLite consensus disorder prediction 175 232 - -
Aip03g01944 986 MobiDBLite consensus disorder prediction 933 986 - -
Aip03g01944 986 MobiDBLite consensus disorder prediction 968 986 - -
Aip03g01944 986 Pfam Formin Homology 2 Domain 543 925 IPR015425 -
Aip03g01944 986 Gene3D Formin, FH2 domain 546 957 IPR042201 -
Aip03g01944 986 SMART it6_source 541 940 IPR015425 -
Aip03g01944 986 MobiDBLite consensus disorder prediction 429 528 - -
Aip03g01944 986 MobiDBLite consensus disorder prediction 368 545 - -
Aip03g01944 986 ProSiteProfiles Formin homology-2 (FH2) domain profile. 541 951 IPR015425 -
Aip03g01944 986 MobiDBLite consensus disorder prediction 942 960 - -
Aip03g01944 986 MobiDBLite consensus disorder prediction 233 250 - -
Aip03g01944 986 MobiDBLite consensus disorder prediction 378 400 - -
Aip03g01944 986 PANTHER FORMIN-RELATED 1 984 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Aip03g01944 986 SUPERFAMILY Formin homology 2 domain (FH2 domain) 601 949 - -
Aip03g01944 986 PANTHER FORMIN-LIKE PROTEIN 1 984 - -
Aip03g01944 986 MobiDBLite consensus disorder prediction 169 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01944 Aip-Chr3 26615151 26621913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01944 244 976 FH2 protein (formin) Gene Family AT5G54650 51.774 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01944 - - ccaj:109810281 730.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01944 03 26615151 26621913 Aip03g01944 03 26615151 26621913 ECH