Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01920 ATGGCTACCTCAATTTTAAGGTCAAATAAAGTAGTTCATTCATTAGGGTTGTTGTGTGTGTTACTTTTGGTGCATGAGGGTGCTGCTTATGATTTCATAGTTGGAGGTCAAAAGGGTTGGAGTGTTCCAAGTGATTCCAATTTCAATCCTTTCAATTCATGGGCAGAAAAGAGCCGTTTTCAAATTGGAGACTCTCTAGTGTTCAACTACCAATCTGGGCAAGACTCAGTGCTGCAGGTGAAGAGCGAAGACTATGCAAGCTGCAACACAAACTCACCATATGCAAAGTTTTCAGACGGCCACACAGTGTTCAAGCTCACCCAATCAGGCCCATACTTCTTCATTAGCGGCAACAAAGATAACTGCCTCAAGAACCAGAAGCTAACCGTCATTGTCATGGCCGACAGAACCAACCGCACCTCCTCCACAGCAAGTCCCACTTCTTCGCCACCTTCGCCGCAGCCGCCATCAGCGCCTTCACCGGCCCCAACCGGCCAAGAAGGGCAGTCTTCTCCTCCACCTGCAGGAACTGTGGAAACAAATCCAACACCCGCACCGTCCAGTGAAGGACATCATCCTCCTAATGCTGCCGCCTCCGCCTTTGTCAACTTTGCTGCTTCGCTTCTAGCAATATCCATGGCTTCTTCAGCTCTCATGTTTTCTCTCTAG 669 0.4873 MATSILRSNKVVHSLGLLCVLLLVHEGAAYDFIVGGQKGWSVPSDSNFNPFNSWAEKSRFQIGDSLVFNYQSGQDSVLQVKSEDYASCNTNSPYAKFSDGHTVFKLTQSGPYFFISGNKDNCLKNQKLTVIVMADRTNRTSSTASPTSSPPSPQPPSAPSPAPTGQEGQSSPPPAGTVETNPTPAPSSEGHHPPNAAASAFVNFAASLLAISMASSALMFSL 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01920 222 PANTHER BLUE COPPER PROTEIN 5 212 IPR039391 GO:0009055
Aip03g01920 222 Pfam Plastocyanin-like domain 40 125 IPR003245 GO:0009055
Aip03g01920 222 CDD OsENODL1_like 30 133 IPR041846 -
Aip03g01920 222 MobiDBLite consensus disorder prediction 169 186 - -
Aip03g01920 222 MobiDBLite consensus disorder prediction 148 168 - -
Aip03g01920 222 Gene3D - 30 145 IPR008972 -
Aip03g01920 222 MobiDBLite consensus disorder prediction 137 196 - -
Aip03g01920 222 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 5 212 - -
Aip03g01920 222 SUPERFAMILY Cupredoxins 29 133 IPR008972 -
Aip03g01920 222 ProSiteProfiles Phytocyanin domain profile. 30 134 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01920 Aip-Chr3 25723452 25725403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01920 15 201 Phytocyanin Superfamily AT3G20570 53.476 2.06e-58 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01920 - - gmx:100792916 271.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01920 03 25723452 25725403 Aip03g01920 03 25723452 25725403 ECH