Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aip03g01908 | ATGCAAATCTTCGTGAAAACCTTGACGGGCAAGACCATCACCCTTGAGGTGGAAAGTTCCGATACAATTGATAATGTCAAGGCCAAAATTCAGGATAAAGAAGGAATCCCTCCTGACCAGCAAAGGCTTATTTTCGCCGGAAAACAACTTGAAGATGGTAGAACCCTTGCCGATTACAACATTCAGAAGGAATCCACACTCCACTTGGTGCTTCGTTTAAGAGGTGGCATGCAAATTTTCGTGAAGACCTTGACTGGGAAAACCATCACCTTAGAGGTCGAATCCTCAGACACCATTGACAATGTCAAAGCTAAAATCCAAGACAAAGAGGGTATCCCACCTGACCAGCAGAGGTTGATTTTTGCTGGGAAGCAGCTTGAGGATGGAAGGACACTAGCAGATTACAACATTCAGAAGGAGTCAACGCTTCACTTGGTTCTCCGTTTGAGAGGTGGCATGCAGATTTTTGTCAAGACTTTGACAGGGAAGACCATAACACTGGAGGTGGAATCCTCAGATACCATTGACAATGTGAAAGCTAAGATTCAGGACAAAGAGGGCATTCCACCAGATCAACAGAGGCTCATCTTCGCCGGTAAGCAGCTTGAAGATGGAAGGACGCTTGCAGATTACAATATTCAGAAGGAGTCCACTTTACATTTGGTGTTGCGGCTCCGTGGTGGCATGCAAATCTTTGTCAAGACACTAACCGGAAAGACAATAACCCTGGAGGTCGAGTCTTCAGACACCATTGACAATGTCAAAGCAAAAATCCAAGACAAAGAGGGTATCCCACCTGACCAGCAGAGACTTATCTTTGCTGGTAAGCAGTTGGAGGATGGAAGGACCCTTGCTGATTACAACATTCAGAAGGAGTCCACCTTGCATCTTGTTTTGCGACTCCGAGGTGGAATGCAAATCTTTGTCAAGACCTTGACCGGAAAGACAATCACTTTGGAGGTTGAAAGTTCTGATACAATTGATAATGTGAAGGCGAAGATTCAGGACAAAGAGGGTATCCCTCCGGATCAGCAGAGGCTCATCTTTGCAGGGAAGCAGCTTGAAGATGGCCGTACTCTTGCTGATTACAACATCCAAAAGGAATCTACTTTGCATTTGGTTCTGAGGCTCCGTGGTGGTATGCAAATTTTTGTGAAGACCCTGACGGGGAAAACCATTACTTTGGAGGTCGAAAGCTCCGATACCATTGATAATGTGAAGGCGAAGATTCAGGACAAGGAGGGTATTCCCCCGGATCAGCAGAGGCTCATCTTTGCTGGCAAACAATTGGAGGATGGTCGTACATTGGCAGACTATAATATCCAAAAGGAATCGACCCTCCATCTTGTCCTTCGCCTTCGTGGTGGCTTTTAA | 1374 | 0.4585 | MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF | 457 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aip03g01908 | 457 | SUPERFAMILY | Ubiquitin-like | 76 | 152 | IPR029071 | - | |
| Aip03g01908 | 457 | ProSitePatterns | Ubiquitin domain signature. | 179 | 204 | IPR019954 | - | |
| Aip03g01908 | 457 | PANTHER | UBIQUITIN 13 | 380 | 456 | - | - | |
| Aip03g01908 | 457 | PANTHER | UBIQUITIN 13 | 210 | 434 | - | - | |
| Aip03g01908 | 457 | PANTHER | UBIQUITIN 13 | 1 | 207 | - | - | |
| Aip03g01908 | 457 | PANTHER | UBIQUITIN 13 | 151 | 359 | - | - | |
| Aip03g01908 | 457 | PANTHER | UBIQUITIN 13 | 75 | 283 | - | - | |
| Aip03g01908 | 457 | CDD | Ubl_ubiquitin | 77 | 152 | - | - | |
| Aip03g01908 | 457 | ProSiteProfiles | Ubiquitin domain profile. | 381 | 456 | IPR000626 | GO:0005515 | |
| Aip03g01908 | 457 | ProSiteProfiles | Ubiquitin domain profile. | 153 | 228 | IPR000626 | GO:0005515 |
Showing 1 to 10 of 55 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aip03g01908 | - | K08770 | sspl:121810032 | 882.863 |
Showing 1 to 1 of 1 entries