Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01898 ATGCCGTCGGTCGCGGATTTCCGCTTCTTCAAGTTCATAATCCCCAACATGGATAATCAAATTGTAAAGAATACTGACGACCTTCTCCAACCTTGCCCGGGAGACCATGAGCAACCCATTGAGATAAGCACCACAAATGGTCAGTCGTGGAGCATCTTGTGGGGCGTCGAGGAGGAGCATCCGCATCGAATCGTCTTCACCGGAGGGTGGCGGCATTTTTACGAACACTACCATCTTCGAATAGGTTCCATGCTGCTATTATCGTATCACCAACCAAAGTTTTTCTATGTAGCCATCCATGGCACAAGTTTCTGCGAGATCAACTATGGAAGCAGAAACTTACGACATGGAAGTCTTCCAGCAATACCGGCACATGGCAACTACACAGTCCAGTTCTTCGCGATAATCCCGGTGAACGACTTTGATACACTGGTATAG 438 0.4795 MPSVADFRFFKFIIPNMDNQIVKNTDDLLQPCPGDHEQPIEISTTNGQSWSILWGVEEEHPHRIVFTGGWRHFYEHYHLRIGSMLLLSYHQPKFFYVAIHGTSFCEINYGSRNLRHGSLPAIPAHGNYTVQFFAIIPVNDFDTLV 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01898 145 Gene3D - 3 105 IPR015300 -
Aip03g01898 145 SUPERFAMILY DNA-binding pseudobarrel domain 33 110 IPR015300 -
Aip03g01898 145 ProSiteProfiles B3 DNA-binding domain profile. 40 103 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01898 Aip-Chr3 25150204 25150805 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01898 40 114 B3 DNA Binding Superfamily AT3G18990 32.000 7.04e-06 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01898 - - ahf:112746889 211.075