Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01890 atgTCTCACTCGAGTCTCGTCTCAGTCACACTGTTAGCATCTCGTGGTTCGTCTGTCTCGTCGCCGGCGGCAGAAGCAACTCGTGGGGTTGTCTCTTGCTTCGTCGCCTTCCGTGGGTGGTCGCCGACTCGCCGTCGACCGTTGAAGGTTCAGTGTTGGCTTCAACTTTCAAATGGGAATTGGGAGCTGGTGAAGATAATAACATCTTCTGGAACTGAGTCTGTTGTTTCACTGACTGATGGGAAAGTTTTAATGCACGATGAAAGCTTAATATCAGCAAATCCTGATTTTCTTGATGGAGTGGATGACCTCATGCAACTTAGTTATTTAAACGAACCTTCAGTCTTATACAACTTACAATATAGATACAACCAGACTATGATCTATGAACGAAGACTTGCTGTTTGGTGGATTTCTTTTCCAGAGTCACTGCGAGGGAATACTTCTTTGGGTTGCGAATCTCAAGAACAGCTCCTGTTGCTCTCTAAAGTCTCAACGTACTGA 504 0.4524 MSHSSLVSVTLLASRGSSVSSPAAEATRGVVSCFVAFRGWSPTRRRPLKVQCWLQLSNGNWELVKIITSSGTESVVSLTDGKVLMHDESLISANPDFLDGVDDLMQLSYLNEPSVLYNLQYRYNQTMIYERRLAVWWISFPESLRGNTSLGCESQEQLLLLSKVSTY 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01890 167 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 79 129 IPR027417 -
Aip03g01890 167 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 42 131 - -
Aip03g01890 167 Gene3D Kinesin motor domain 51 150 IPR036961 -
Aip03g01890 167 PANTHER MYOSIN 42 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01890 Aip-Chr3 25029895 25035118 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01890 38 131 Myosins gene family AT1G50360 63.918 3.85e-35 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01890 - K10357 lja:Lj0g3v0085549.1 135.191