Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01884 ATGGACGCCGCCCAGATCCATGACCCTGGCAAGACGCACGTCTGGCTCGGAACTTTCGAAACTGCAGAGGGGGCAGCGCGTGCGTACGGCGCCAAGGCTAAGACCAATTTTCTGATGGCGGCGGAGCTTCTGAACAACAGCAACAACTTCGTTCACATTAACAATAACACATGTAGCCCGAGTCAGAGTAATACGCTTGATTCATCTTCGCGGCTTCCGCCACCGCCACCAATGAGCCGCCAGCGAGATGTGTCTCATAGGCAATGCAACGACTTCGATTCTTCTTCTGGAGTGGACTACGAGGGCATGTCATACAAGGGGCTATTGGATCTCGACCTCACCATTGCTCCTGCGATAAAAATTGTGTGTTTATCTACCTTAGATTAG 387 0.5194 MDAAQIHDPGKTHVWLGTFETAEGAARAYGAKAKTNFLMAAELLNNSNNFVHINNNTCSPSQSNTLDSSSRLPPPPPMSRQRDVSHRQCNDFDSSSGVDYEGMSYKGLLDLDLTIAPAIKIVCLSTLD 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01884 128 MobiDBLite consensus disorder prediction 55 96 - -
Aip03g01884 128 ProSiteProfiles AP2/ERF domain profile. 1 47 IPR001471 GO:0003700|GO:0006355
Aip03g01884 128 SUPERFAMILY DNA-binding domain 4 35 IPR016177 GO:0003677
Aip03g01884 128 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 3 71 - -
Aip03g01884 128 MobiDBLite consensus disorder prediction 55 69 - -
Aip03g01884 128 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 4 3 71 - -
Aip03g01884 128 SMART rav1_2 3 47 IPR001471 GO:0003700|GO:0006355
Aip03g01884 128 Gene3D AP2/ERF domain 3 45 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01884 Aip-Chr3 24835710 24836223 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01884 3 70 AP2-EREBP Transcription Factor Family AT3G15210 53.165 1.54e-13 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01884 K09286 - gmx:100500601 68.5514