Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01883 ATGGATCGGAGCTCCTTCTCTGCCGGAACCCGGAAGGCCCAACCCAAATCCGATATATACTCTACCTTCGTCGTCCACAACGATGATGACGTCGGAGACGGCGGAACAATCCGCCGCCGGAAATCCGGAATCCCGGAGTCACAGGAGGATCTATACGGGACAATGGTGTACAAAGAGAACGGCCACGACGACGACGACGAAGACTCCTCCCTCCCTCCACTCCTCAAGCGCCTTCCCAAGGACTTCGGAGGCGGTGCCTCGATGGATTACGACGACGACGACGACGACGACGAAGGTGCTGGAGATTTTGGCACCATGATTGTGAAGACTGACCGGAGCCGGCAGCGGGAGCGGTCTTCTTCTTCCGGCTTGGTTTCGCCATCGGGATCGACCTGGAAGGCTCAGAGTTCTTCTCAGGCGAGCGTCGGCGGAGACGACGACGATGACGACGACGACGGTGGCGGTTTTGGGACGTTCGTTGTGCGCTCGACGGTGAGATCCAGCGAGAGAGAGTCGATAAGCGGAACCGTGGTGCGTAGGACCGCCGGCGGCAGTGGTGCCGGTTCAACGATGGAGAGGGCTGTGGCGAGCATGCAGGCGGCGGGAGAATTTGGGAAGCAGAGGAAAGGGAGCGGTTCCTCGCAGAACGAGGATGCGAGGCAGCAATTGATAACAACGAAGATTTCGGCGAGTTCGATCCCGGAGAGTGTTACCAGAGAGGATCCTACAACCAAGTATGAATTGCTCAATGAACTTGGGAAGGGATCCTATGGAGCTGTTTACAAAGCAAGGGATTTAAGGACATCGGAGATGGTTGCTATCAAAGTCATATCATTATCTGAAGGGGAGGAGGGATATGAGGAAATCCGTGGTGAGATTGAGATGTTACAACAATGTAATCATCCAAATGTTGTCCGCTATCTTGGGAGCTACCAAGGAGAAGAGTATCTTTGGATAGTGATGGAATACTGTGGTGGTGGTAGTGTTGCTGATCTGATGAGCGTGACTGATGAAGCACTGGATGAGGGTCAAATAGCATATATCTGTAGAGAAGCACTGAAGGGACTTGAGTACTTGCACTCAATTTTCAAAGTCCATCGAGACATTAAAGGCGGAAATATCTTATTAACTGAACAAGGAGATGTCAAGCTAGGGGATTTTGGTGTTGCTGCACAGCTGACAAGGACTATGTCAAAGCGCAATACGTTCATTGGAACCCCTCATTGGATGGCTCCAGAAGTTATTCAGGAAAGTCGCTATGATGGAAAGGTAGATGTTTGGGCTCTTGGTGTGTCTGCGATTGAAATGGCTGAGGGAGTTCCTCCAAGATCATCAGTGCATCCGATGAGGGTTTTATTCATGATATCCATTGAGCCAGCTCCAATGCTTGAGGATAAAGAAAAATGGTCTCTATATTTTCATGATTTTGTTGCGAAGTGCCTGACCAAAGAGCCTCGGCTCCGCCCCACTGCATCTGAGATGTTGAAGCATAAATTCTTTGAAAAATGGAAAACTGGATCTGCTGCAGTGTTGCCAAAACTGGAAAAGGCAAGGCAAATCAGGGCATCAATGGCTTTGCAGGTGCAAACTCTGGCCCCAACTCCATTGGAAGATGAGCAGCCTATGGTAACTTCCATGCTAAATGATGAATATGGAGATACTGTTCCATCCGGACATCAGAACCTAGCAGTGCAGGAGGCCACTGATCTTTCTTCAAGTGGTGGCGTGAGGGAAGATGATGGAGGTGAAGCAGGAAACTTTGGAACTATGATAGTCCATGGAGATGAGGTACATAAGATCACACAGGATGGAGATTCTGCAGGTTCCTTATCTGCTTTCACGGGTGGAACAGGATTGGCCGACTCTAGGGTTGACACCCTAAAAGTTGGTACAACAAACATTGCCTCTTTTAGAGGATCTAATCCAACTACAGATACCATACAATCAACTTTACCTCGTGTTAGAAATTCAACCGAGCAGAACCTCAAAACGCAAGGTAGTTTTCGTGCACACGCTGGAATTGGTAGTGATATAAGCACTGGCACGTTGAAGAATGATACAGTCTTCCGCAAGTCATTTGCTTTACAGGATAAGCTATGGTCCATTTATGCAGCTGGTAATACAGTGCCCATTCCGTTCTTAAGGGCTACAGACATATCCCCAATTGCTCTGCTGTCAGATAATGTGCTTGGTGGCTTGCAACCAGATACCAGTGAGACTGGGGAAGTAGAATCATTGCAAGAGCTTTTTAGTGGTGATGTGCAATCCAAAAAGGGTCGGAGAGGACTAAATGAGATGCCCCTTCCTCCAAGCATTTACCAGCGGCTTACATCAAGTTCCACTCTAATGAATTTGGCTCAGGCTTTAGCTTATCATAAGATGTGTTACGAAGATATGCCACTGCAGGAGTTGCAAGCAACGCAGGAGCAGCGGACAATTCAAAATCTCTCGGACACGCTTAGAACCATTCTTCGTTTGTAG 2481 0.4881 MDRSSFSAGTRKAQPKSDIYSTFVVHNDDDVGDGGTIRRRKSGIPESQEDLYGTMVYKENGHDDDDEDSSLPPLLKRLPKDFGGGASMDYDDDDDDDEGAGDFGTMIVKTDRSRQRERSSSSGLVSPSGSTWKAQSSSQASVGGDDDDDDDDGGGFGTFVVRSTVRSSERESISGTVVRRTAGGSGAGSTMERAVASMQAAGEFGKQRKGSGSSQNEDARQQLITTKISASSIPESVTREDPTTKYELLNELGKGSYGAVYKARDLRTSEMVAIKVISLSEGEEGYEEIRGEIEMLQQCNHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMSVTDEALDEGQIAYICREALKGLEYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGVPPRSSVHPMRVLFMISIEPAPMLEDKEKWSLYFHDFVAKCLTKEPRLRPTASEMLKHKFFEKWKTGSAAVLPKLEKARQIRASMALQVQTLAPTPLEDEQPMVTSMLNDEYGDTVPSGHQNLAVQEATDLSSSGGVREDDGGEAGNFGTMIVHGDEVHKITQDGDSAGSLSAFTGGTGLADSRVDTLKVGTTNIASFRGSNPTTDTIQSTLPRVRNSTEQNLKTQGSFRAHAGIGSDISTGTLKNDTVFRKSFALQDKLWSIYAAGNTVPIPFLRATDISPIALLSDNVLGGLQPDTSETGEVESLQELFSGDVQSKKGRRGLNEMPLPPSIYQRLTSSSTLMNLAQALAYHKMCYEDMPLQELQATQEQRTIQNLSDTLRTILRL 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01883 826 Pfam Protein kinase domain 246 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g01883 826 SUPERFAMILY Protein kinase-like (PK-like) 229 521 IPR011009 -
Aip03g01883 826 MobiDBLite consensus disorder prediction 31 46 - -
Aip03g01883 826 MobiDBLite consensus disorder prediction 56 74 - -
Aip03g01883 826 ProSiteProfiles Protein kinase domain profile. 246 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g01883 826 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 189 816 - -
Aip03g01883 826 Gene3D Transferase(Phosphotransferase) domain 1 242 532 - -
Aip03g01883 826 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 189 816 - -
Aip03g01883 826 MobiDBLite consensus disorder prediction 200 219 - -
Aip03g01883 826 MobiDBLite consensus disorder prediction 1 21 - -
Aip03g01883 826 MobiDBLite consensus disorder prediction 1 194 - -
Aip03g01883 826 CDD STKc_MAP4K3_like 245 500 - -
Aip03g01883 826 ProSitePatterns Protein kinases ATP-binding region signature. 252 275 IPR017441 GO:0005524
Aip03g01883 826 MobiDBLite consensus disorder prediction 119 142 - -
Aip03g01883 826 SMART serkin_6 246 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g01883 826 MobiDBLite consensus disorder prediction 161 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01883 Aip-Chr3 24680302 24695028 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01883 1 826 MAP Kinase Kinase Kinase Kinase AT1G69220 60.000 0.0 877
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Pl Aip03g01883 Pkinase 1.7e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01883 - - gmx:100804995 1231.85