Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01881 ATGGAGGAGACACAAGAAGATGCAGGGCAGGCAACGCAAAGGCCATCCAGCATGTCAGCGTGGCCTTCAGATTTTGCTGGAAAATTTGGATCTGTTTCTTTGGGTTCTCAAGAAACCTTAAATGATAGTGACTCACATAGACATTCTAATGAAGATGTCATGTCACCGCATAAAGCATCACAGATTCTCTGGCACACTGGAATGCTTTCAGAACCAATACCAAATGGTTTTTATTCAGTTATTCCGGAGAAAAGACTCAAGAAATATTTCGATGATATTCCTACTTTGGATGAGCTTCAGGCTTTGAGTATAGATGGTTTTAAGGCTGATATCATTCTTGTGGACACAGAGAAAGATAGAAAGTTATCCATGTTGAAGCAACTAATTGTGACATTGGTCAAAGGATTGAACTCAAATCCAGCTGCAACGATTAAGAAGATAGCTGGATTAGTTTCTGATTTTTATAAGCGACCAAATGCAGAAAGTCCCGCAAAAGCTGCACTAGAGGAGCCCTCCCATGTGTTTGAAAATTGTGGTGTCCAGTTGCTGGGGCAGATAAGGCATGGTTCATGCCGTCCTCGAGCTATCTTATTTAAAGTATTAGCAGACACTGTAGGTCTTGAAAGTAGGCTTATGATGGGTTTCCCAAATGATGGAGCTGCTGAATGTATAGACTCTTACAAGCATATGTCTGTGATGGTTGTATTAAATTCTGTGGAGCTGCTGGTTGATCTCATGCGTTTTCCTGGCCAATTGTTACCACGATCAACCAAGTCAATTTTTATGACACATATATCTGCAGCAGGAGAGAGTGATTCAGCCGAAAATGATTCTTGTGATTCACCATTGGAACCAAACAGTCCTTTGTATGGGGTTTCAGAGAGGTTAGATCCTGAGAAGGAAAACTTTCAGTTCCGAAGAAAATTTGAAGGGTCTTCAAATGTGTCAGGCCTCTCCTTGAGAAATTTGATGTTACGATATCCCAGTCTTGAAAGGAAAATGAGTTTGTCTCATAGTGAACCCAACATTGCAACTGCATTTGGTCGGCATAGTAGGAGAAAGGTCATTGCTGAACAGAGGACTGCTAATTCAAGTCCAGAACATCAATCATTTCGAGCACATCGGCGATCCATGCTTAGCGGTGATAGGTTAGGATTTAGAGATTTTGCTGATGACCAGAGCACATTAAGATCCAGCTATAGGTCAGATGGTGCATCATCTTCACAAGCTCGCAGGATACGAAGAAGTGTCAGTGTTACTCCTGAGATTGGTGATGATATCGTAAGGGCTGTACGGGCAATGAATGAAGCACTTAAGCAAACTCGTCGTCTAAGAGAACATGGGGATCATAGTTCTTTGTCCAATTCTCTGAATGATAGAACTAGTGGTCCAGATCTTCAGAGAAATCTGTCAAATTTCCATGGTCGTGGTGACAGTTCTCAGAAAGCAATGTCATTACCGTCTTCACCGCATGATTATAGAGGACAAGCGCCTGAGAGAGGTGGGCCATCTGGATATGGAGTGAATGCTAAACTGGAGTTGACTTGGAATAAAGTTCTCGAATCACAAATGTTCAACAATAAACCTCTGTTACCATTTGAAGAATGGAATATTGACTTCTCGGAATTAACCGTTGGAACTCGTGTTGGGATTGGGTTCTTTGGCGAGGTTTTCCGTGGCATGTGGAACGGCACAAATGTTGCAATCAAGGTTTTTCTTGAGCAAGATTTAACTGCTGAAAATATGGAAGATTTCTGCAATGAGATAAGCATTCTCAGCCGGCTGCGACATCCTAACGTTATTCTGTTTCTTGGTGCATGCACAAAGCCTCCACGTTTGTCAATGGTTACGGAATATATGGAGGTGGGATCTTTGTATTTCTTGCTTCATATGAGTGATCAAAAGAAGAAGCTTAACTGGAAGAAAAGGCTAAAGATGTTGCGTGGCATATGCCGGGGCTTGATGCACATCCATCGTATGAAGATTATTCACCGTGATGTAAAAAGTGCAAATTGTCTTGTAGACAAGCATTGGACAGTGAAAATCTGTGATTTTGGACTCTCAAGAATAGTGACAGAGACTCCCATGAGAGATTCTTCGTCAGCCGGAACTCCAGAGTGGATGGCTCCTGAACTCATTCGAAATGAACCATTCACTGAAAAATGTGACATCTTTAGTCTTGGGGTGATAATGTGGGAGCTCTGCACCTTGAGTAGGCCATGGGAAGGTGTACCGCCAGAGAGGGTTGTTTATGCTGTAGCTCACGAGGGTTCCAGATTGGAACTTCCTGAAGGCCCAATGGGCAGGCTGATATCAGATTGTTGGGCAGAACCGCATGAGCGACCAAGTTGCGAGGAGATCCTCTCTCGTTTGGTAGACATTGAGTACTCAATGTCTTGA 2400 0.4283 MEETQEDAGQATQRPSSMSAWPSDFAGKFGSVSLGSQETLNDSDSHRHSNEDVMSPHKASQILWHTGMLSEPIPNGFYSVIPEKRLKKYFDDIPTLDELQALSIDGFKADIILVDTEKDRKLSMLKQLIVTLVKGLNSNPAATIKKIAGLVSDFYKRPNAESPAKAALEEPSHVFENCGVQLLGQIRHGSCRPRAILFKVLADTVGLESRLMMGFPNDGAAECIDSYKHMSVMVVLNSVELLVDLMRFPGQLLPRSTKSIFMTHISAAGESDSAENDSCDSPLEPNSPLYGVSERLDPEKENFQFRRKFEGSSNVSGLSLRNLMLRYPSLERKMSLSHSEPNIATAFGRHSRRKVIAEQRTANSSPEHQSFRAHRRSMLSGDRLGFRDFADDQSTLRSSYRSDGASSSQARRIRRSVSVTPEIGDDIVRAVRAMNEALKQTRRLREHGDHSSLSNSLNDRTSGPDLQRNLSNFHGRGDSSQKAMSLPSSPHDYRGQAPERGGPSGYGVNAKLELTWNKVLESQMFNNKPLLPFEEWNIDFSELTVGTRVGIGFFGEVFRGMWNGTNVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMEVGSLYFLLHMSDQKKKLNWKKRLKMLRGICRGLMHIHRMKIIHRDVKSANCLVDKHWTVKICDFGLSRIVTETPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLSRPWEGVPPERVVYAVAHEGSRLELPEGPMGRLISDCWAEPHERPSCEEILSRLVDIEYSMS 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01881 799 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 26 797 - -
Aip03g01881 799 ProSiteProfiles Protein kinase domain profile. 543 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g01881 799 Pfam Ethylene-responsive protein kinase Le-CTR1 58 252 - -
Aip03g01881 799 MobiDBLite consensus disorder prediction 454 487 - -
Aip03g01881 799 Gene3D Transferase(Phosphotransferase) domain 1 622 798 - -
Aip03g01881 799 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 26 797 - -
Aip03g01881 799 ProSitePatterns Serine/Threonine protein kinases active-site signature. 662 674 IPR008271 GO:0004672|GO:0006468
Aip03g01881 799 SUPERFAMILY Protein kinase-like (PK-like) 518 791 IPR011009 -
Aip03g01881 799 Pfam Protein tyrosine and serine/threonine kinase 544 791 IPR001245 GO:0004672|GO:0006468
Aip03g01881 799 CDD STKc_MAP3K-like 549 791 - -
Aip03g01881 799 MobiDBLite consensus disorder prediction 357 377 - -
Aip03g01881 799 ProSitePatterns Protein kinases ATP-binding region signature. 549 570 IPR017441 GO:0005524
Aip03g01881 799 Gene3D Phosphorylase Kinase; domain 1 536 621 - -
Aip03g01881 799 SMART serkin_6 543 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g01881 799 MobiDBLite consensus disorder prediction 441 505 - -
Aip03g01881 799 MobiDBLite consensus disorder prediction 1 54 - -
Aip03g01881 799 MobiDBLite consensus disorder prediction 396 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01881 Aip-Chr3 24475189 24488602 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01881 1 798 MAP Kinase Kinase Kinase AT3G58640 67.683 0.0 1116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Aip03g01881 PK_Tyr_Ser-Thr 7e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01881 - - gmx:100806527 1299.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01881 03 24475189 24488602 Aip03g01881 03 24475189 24488602 ECH