Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01877 ATGATAAATCGGGTTGCACCTGCATTTCTCGTTCCTGTTTTATTCTCAGTCATCTGCATATTCTTGGGAATGTTTGTGGCTATGAAGGATAAACCTTCAGAGGGATTTACTGGTTTGAGTTGGGAGACAATTAAAGATAATTGGAGTTCAGATTATCAAAAAACTAATGATGCTGGAATCCCAGAAACTGATGGCCATGTAAGCTGGAATTTCAATTCATTAGTATGCCTCTTTTTCCCAGCTGTGACAGGAATAATGGCAGCACTTCGGAGCCTTCGATCACTAAGAGAAAACCAAGTACACCCAAAGAATTGGTATCCAATTCCACTCGTGTTTTGCCGGCCCTGGGGTCAACTACCAGAAAATGTTCCATGTCATCCCAAACTTGCAGATTTTGCTAACTGTATGAAGAAGAAAGGTCGAGGAATGTCTATATTTGTCTCTATACTGGATGGAGACTACCATGAATGTGCTGAAGATGCCAAGTCTGCTTGTAAACAGCTCACTACCTACATTAATTACAAGAATTGTGAAGGTATGGCTGAGATTGTTGTCGCCCCTAATATGTCTAAAGGCTTTCGTGGTATCGTTCAGACAATGGGCCTTGGGAATCTCAAGCCAAACATTGTGGTGATGCGCTACCCAGAGATCTGGCGTTGGGAGAACTTAACAGAAATCCCCAAGACATTTGTTGGTATATTTAACGACTGCATTGTTGCAAACAAGGCAGTAGTCATAGTGAAGGGTCTTGATGAGTGGCCCAATGAGTACCAGAAGCAGTACGGCACGATTGACCTCTACTGGATTGTGAGAGATGGTGGTCTCATGCTGCTGCTTCTTACCAAGGACAGCTTTGAGAGTTGCAAAATTCAGGTTTTCTGCATTGCAGAAGAGGATGCAGATGTAGAAGTGCTGAAAGCTGATGTGAGAAAATTCCTTTATGATCTTCGGATGCAAGCAGAAGTCTTTGTCATTCCCATTTCTTCACAAGAAAATGGTGGGTCTCCCCAGGATGAGTCACAGATGCATGTTTGTATGCTATGCTTGTTTGTATCTTCCTAG 1062 0.4266 MINRVAPAFLVPVLFSVICIFLGMFVAMKDKPSEGFTGLSWETIKDNWSSDYQKTNDAGIPETDGHVSWNFNSLVCLFFPAVTGIMAALRSLRSLRENQVHPKNWYPIPLVFCRPWGQLPENVPCHPKLADFANCMKKKGRGMSIFVSILDGDYHECAEDAKSACKQLTTYINYKNCEGMAEIVVAPNMSKGFRGIVQTMGLGNLKPNIVVMRYPEIWRWENLTEIPKTFVGIFNDCIVANKAVVIVKGLDEWPNEYQKQYGTIDLYWIVRDGGLMLLLLTKDSFESCKIQVFCIAEEDADVEVLKADVRKFLYDLRMQAEVFVIPISSQENGGSPQDESQMHVCMLCLFVSS 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01877 353 PANTHER CATION-CHLORIDE COTRANSPORTER 1-LIKE ISOFORM X1 1 87 - -
Aip03g01877 353 PANTHER CATION-CHLORIDE COTRANSPORTER 1-LIKE ISOFORM X1 88 340 - -
Aip03g01877 353 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 1 87 IPR004842 GO:0006811|GO:0015377|GO:0016021
Aip03g01877 353 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 88 340 IPR004842 GO:0006811|GO:0015377|GO:0016021
Aip03g01877 353 Pfam Solute carrier family 12 259 324 IPR018491 GO:0006811|GO:0016020|GO:0022857
Aip03g01877 353 Pfam Solute carrier family 12 127 248 IPR018491 GO:0006811|GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01877 Aip-Chr3 24359716 24365396 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01877 1 99 Inorganic Solute Cotransporters AT1G30450 61.616 1.41e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01877 K14427 - pvu:PHAVU_009G216800g 463.766