Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01875 ATGGATCTTAAAATACCAATAGATGACCAATTCTCCAAGTTGCATCCTTCATTACCATTAAGCACCAGAATTGGAATAGTTGGTGCTGGTCCAAGTGGTTTATCAGCTGCATATGCACTCTCTAGACTTGGTTATAATAATGTCACAGTTTTGGAGAAACATCACACAGTTGCTGGCATGTGTGAATCAGTAGAAATTGAAGGGAAAATTTATGATCTGGGTGGGCAAGTTCTTGCTGCAAATAGTGCTCCAGTCATCTTTCATCTCGCGAAAGAGACAGGATCGGAACTAGAAGAAATGGACTCACACAAGCTTGCTCTCATTGACCCTTACTCTGGAAAGTTCCAAGATGTTAATGTTGCTGATGATTATGTATCTGTTATGACACTTACTTTGGATATTCAAGAAAAGGTGAAGAACTCTAAGCATTTTGGGATCCATGCTGTTAGCCAAGTTGCTTCAGACTTAACTACAGATTATCTTGAGAGTCATGGACTCAAATCTGTTCCTAAATCTGTGGCTTATGGTTACACTGCCTCAGGATTTGGATTTGTCCAAGACTTGCCTTATGCATACATTCATGAATTTACTAGAACATCAATGGCCGGAAAAATTCGACGCTTCAAAGGTGGATATACAAGTCTATGGAAGAAGATTGCTGAATCACTTCCTATAAAACTTCATTGTAACACTCAAGTGTTGGCGATCAGACGTAGCTCTGAAAGTGTCAAAGTAACTGTCAAGAGATTAAATGAAAATGAAAAAACCATGGAGTTTGATAAGATCATAATCTCTGGTAATTTTCCCTTAAGATATGGAAGAACTTATAGATCAGTGCCTTCAGCTTTCACAGAGTCTGAAGAAGAAGTCATGGATGCAACTGAACTTGAAAGGGACTTGTTCAGCAAAGTAGAGACATTTGATTACTACACCACAGTTTTTAAGATTAAAGGATTTGAACATCTTCCAATTGGGTTCTTTTACTTTAGTGAATACATGGAAGATCCCAACACCATTGGAAATCCTGTTGCAATGCAGAAGTTTTATGATGACAGTGACATATTCTTGTTCTGGTCTTATGGCAACTCTTCTGATATTAAGGGACCAACTGTCATCGAGCTTGCGATTAAAGCGGTTGAATCCATGGGGGGGAAAATTGACAAATTCATCCTTCAACGTCGCTTCAAGTATTTTCCTCATGTTAACAGCCAAGATATGAAATCTGGTTTCTATGAAAAGCTGGAGTCAGAACTTCAAGGTTCAAGGAATACTTACTATGTCGGCGGCCTTATGGCTTTCGAGCTCACAGAGAGAAATTCATCCTATGCCATGGCTCTCATGTGTAAGAACTTTGCAACTAGCAGTGATTTGCCAATGTTCCCTTACACTAAGAGTTTGTTTCCACTACAAACTGAGTTCCAGAAAAAGGAGCCTAGAGAACTTGGTGAATTGCCTGGGGTGCAATTTCCCAATTTGCCCTCTTTGAACAGCTATTTGAAGCACTGGGGAACTCATCCAATCACTCAAAACAGAACTCTTTATTCTTGGATAAATGAAGAAGGAGAAGTTGTATGCACAAGGAGCTATGGAGAACAAAATTCCAATGCTTCTTGTATTGCTCAGAATCTCTTATCATGCCGAAAGCCAATCATCAAGCCCGGTGACAAGGTTCTCCTAGTCTATGTCCCCGGTCTGGATTTCGTCGATGCCTTCTTCGGATGCATAAGGGCTAAAGTTATACCAGTTCCTGTTCTTCCTCCAGACCCCATGCAAAAAAGTGGACAAGCACTTGTGAAAATTGACAATATTGCAAAGTCATGTGGCATAGTGGCAATTCTATCAACAAAAGGTTATCACTCAGCCGTGCGGGCCGGATTTGTTAAAGGTCTAATCTCATTATCCGGAAAAGATGGGAAGTCTTCAGCTAGATGGCCAAATCTTCCATGGATGCACACTGATTCTTGGATCGACAAGTCAAAAAGTCTGGCTTCTAAATATGTAGATGATCAATGTGAGGCTCAACCTGGTGATATTTGTTTCTTGCAGTTTACGTCAGGTTCAACTGGGGATGCTAAAGGAGTGATGATTACTCATGGAGGCCTAGTTCACAATGTGAAGTTGATGAGAGGAAGGTACAAGAGCACCTCGAGGACCATGCTAATAAGCTGGCTTCCTCAGTACCATGACATGGGGCTCATTGGAGGACTTTTTACAGCTCTTGTTAGTGGTGGATCGGCCGTGTTGTTTTCGCCAATCACATTCATCAAGAAGCCATTGTTGTGGCTTGAAACTATGAGTAAGTACCAAGCAACTCATACTCCAGGATATGGCTTGGCCGAAAACTGCGTTTTCGTCAGCTGCGCATTTGGACAAAGTAATCCTATTCTTGTTGATTGGCAAGGAAGAATCTGCTGTGGATATGTCCAGCCAGGAGATGCTGATGTTGACATCAGAATTGTTGATCCTGAGAGTGGCGAAGAGCTTCAAGAAGATGGAAAAGAAGGAGAGATTTGGATAAGTAGTCAAAGTTCAGGAATTGGGTATTGGGGAAAGGATGAACTGAGCCAAAAAACTTTCAGGAATGAGCTTCCAAACCATCCTGGAAGAAACTTCACAAGAACTGGTGACTTGGGAAGGATAATAGATAGGAAGCTATTCATCACAGGAAGAATCAAGGATCTGATCATTGCAGCTGGGAGAAATATATACTCATCAGATGTTGAAAAGACAGTTGAGAATTCATCCGAATATCTTCGTCCCGGGTGTTGCGCTGTCATTGGTGTCCCTGAGGAGATTCTATCAGCAAAAGGTATTGCCTTGCCTGACGGGTCTGATCAAGTTGGCCTCGTTGTGATTGCAGAAGTAAAGGATGGTAAATCAGTTAGCAAGGATGTGATTGAGCATATTCAAACTCGTGTTATAGAAGAACATGGAGTTAGTGTTGCTTCTGTCAAGTTGATCAAGCCAAGAACCATCAGCAAAACAACATCAGGAAAAATCAAGAGGTTTGAGTGTCTCAAACAGTTTGCAGATGAAACACTGAACTTGGTGCCACAACCTCTCTTGACAAAGAAAAAATTGGTAAGGTCATTTACTACTGGAACTTGCAAAGATGGAAGAACACCAAGGTCCAATGTAGCAAAGAACAATCTTGGAACTAGCCAAAGAATCAGCAACAAGGAAATTGTGGAGTTCTTGAAAAAGCTTATTTCTGAGCAGGCAGGAATCCCAGAAAGTGACATATCAGTCACAGATAACATAACATCTTTTGGTGTTGACTCAATTGGTGTTGTCAAAGCATCACAAAAACTCTCAGATTTTTTGGGAGTTCCGGTTGCAGCTATTGATGTCTTCACTACTTCTTGCATTCAAGAGTTGGCTAACTTCTCAGAAAATCTTCTATTCAAGTCTAAGCCACAACTTGTTAGCAATCCATCCAATGCTTCAGAAGAAGATATAGAGATTGCTGAATTGGTTATGGATGTGTCCAAGACTCACCAATGGGGTATTCGTTTACTTCAACTCCTAGCACTTTTCTATATTACTCTCATGCTGGTTTTTCCTGCTTACATATCCATCACTGCTTTTCTAAGTTTCAATCAAAGTATCAGTGCATTAGTGGAAGGAATTTCATGGTCAAACTACTTAATTTCTTTGACTTTGGCACCCCTTTCTTGGATCCTATGCATTGCTTCTACTAGCATTTGCATTTCAATTTTTGGGAATTCTTTCTTGAGGCCAAACTATGCCCTTGTTCCTGAAATCTCCATCCATTCAATGGATTTTATCAAGTGGTGGACACACTATAAAACTCAAGAAATTGCTTCTAGAGTCCTAGGAGTACACCTCAGAGGAACAACATTCCTTAAGTATTGGTTTGAGATGCTTGGTGCAAGAATTGGATCCTCAGTTTTGCTCGATACAGTTGACATCACAGACCCGTCTTTGGTCTCAATTGGAGATGAAGCTGTCATTGCTGAAGGGGTTTTGGTTCAAAGCCATGAGGTAAAGAATAGGATCTTGAGTTTCAATCCAATTAGGATTGGAAAAAGTTCTTCAGTTGGACCTTATGCTGTTATTCAAAAAGGTAGTGTTATTAAAGATGGTGCTGAGGTACAACCCTTGCAAAAGGTTGAAAAAGGACAGCATGTGCTCAAGCCTACAAAGCTTAATAATGTTAAAGAGAGTGCAACAATGCTAATTACTACAGACAAAAATGAAGCTAGTGCTATCTACCAATTGATGGGGATCTATGTTGTTGGCTTTGTAAGCGCTCTTGCTGCAGCCATTACATACTTTCTCTACACAAGGCTCTTCCAAAAACCAACATCATTACAACACTTTTCATTCATGTGCATAAGTGGGGCTTTCCACTGGATTCCTTTCACTATTATTGCTTATGCCACCATGCTTTCTGAATTCCCATCAAGTGCCATTGTATTCACCATTTCACTGGCATGTGCTTACTTGCTTCATGGTCTCATTCTCAGCATTCTCACATGCTTCTTCATTCGTCTTCTTCATGGTCAAAAGCAAAACCACTTTAAAACATGGCTTCGAAATCAATTGAGTCTTTCCTGCCACCTTAGATTTGCAAAACTCCTCACAGGAACAGAAGCTTTTTGTGTATATTTGCGCCTCTTAGGTGCAAAAATTGGCAAGCATTGTTCTATAAGAGCCATCAACCCAGTTTCAAACCCAGAGCTCATGGCAATTGGTAATGGTGTTCATCTTGGTGATTTTAGCAGAATAATCACCGGTTTCCATTACTCAAACGGATACACTTGTGGAAAAATAGAGGTTCAAGACAACTCAGTTGTTGGAAGTCAAAGCATTATTCTCCCTGGTTCTCATGTTGAAAAGAATGTCATTCTAGGAGCACTTTCAATTGCTCCAATGAATTCCATACTCCATGAAGGTAGCATGTACATTGGATCTCAAACAAGGGTTATTACCAAAAAACCCACAAGTGGTTTAGATGAACGAATAGAAGAGATGGACATGGCTTACAAGAAAGTAGTAAGTAACTTGTCTGCAAATTTAGCCACCACAACCATGAATGCTAAGGCAAGATATTTCCACAGAATTGGAGTTAGTGGAAAAGGGTACCTAAAAATGTATGACAAAATTGATGGAATTCCAATGCACAAGATTTTCCACCCTGGAAAGAGCTACCCTATCTTGATCCGACATAGCAATAGCTTGAGTGCTGATGATGATGCAAGAATTGATGCACGTGGTGCATCTCTGAAGATACTCTCTGATGAACCTGCTTCTAACAATGCTCTCTTTGATCTTACATTGAAGACAGGCAAGGCATTTTATGCAAGAACTTTGGCTGATTTTGCAAGTTGGTTTGTGTGTGGACTTGCTGCAAGAGAGGAACTAGTTAAGAAATTCCCACATCTTCGTGAAGCAGTGTGGAATTCTCTTAGAAATGCTAACTCATATGCTGAATTGCATTACTACTCCAACATTTGCAGGCTCTTGCGCTTCAATGATGGACAAGAAATGTATGTGAAGTTCAAGTTAAGACCCTATGACAAAAGCATTGGTGAGAACACAGGTATGGTTAAGCCAATTGGGATTCTTCCACCAGAAACAGGTGCTATTCCAAGGGATGAAAATGATAAACGCCCTCTTCTTTTCCTTGCGGATGATTTCAAGAACCGCGTGAGTTCACCAGGTGGAGTTCATTATGTTTTCCAAATCCAAGTTCGACCGGTGCCGGATGATGAAGCCACACGTGATGTTGCTTTGGATTGCACAAGACCATGGGACGAAAATGACTTCCCTTACATTGATGTTGGAGAGATCAATATCACTGAGAATCTTTCTAAGGAAGAATCAGACATGTGTGAGTTCAATCCTTATCTCAAAAGCCATGAGTTAGATGTTATTCCTGCTACTTCTAACTCTCAAAGTGCTTCAATGGATCATGGTCGTTCATTGATCTATGAGATTTGCCAGTATGTTCGCAACAAGCGACCGCTCCCAGAATCTTGGAGGAACCTTATTGAGCAATCCGTGGTTAAGGTTGACTTATCATGTTGTCCAATGGCGGCAGCAGCATCATTGCCTAAAAAGCAGCCACAAAAAGTAACATTGACAAGAACTTGGTATCAAACTTTCTCAGCACTCTTCATTCAACCTTTTCTTCAAACAGTTTTACCTCATGCTGTGATTGGTTTATCTATTTATGCTCCCTTGTGTTGTATTGTATACTTAAAGAATGCCAATGGATTCCCACTGCATTGGATGCTTCCAATATTTTGGATTCTCTCAGGTGTTATGGCTGCATTGGCTTGTGTTATAGCCAAATGGATTCTTGTTGGAAGAAGGAAAGTTGGTGAAACAATACCTCTATGGAGCATAAGGATCATCATGGATAGCACATGGCAAGCCATAAGAACATTGATTGGAGATTATTTCATGGACATGACAAGTGGTTCATTTTTATTTATGGTTTGGATGAAGATGATGGGTGCAAGCATTGACATAATGGATGATGGTGCTTATATAGATAGTAGCATGGGATCTTTGTTGAACCCTGAAATGGTAAAGATTGAGGGAGGGGGTTGTGTGGGAAGAGAAGCATTGCTATTTGGACACATATATGAAGGTGATGAAGGTGGAATAGTAAAGTTCGGAGAAATTAAGATTGGTGAAGATGGGTTTGTTGGGAGTAGAGCTGTGGTTATGCCTGGTGTTCATGTGGAGAATGAGGGAAACCTAAGTGCCTTAACACTTGCCATGAAAGGTGAAATCATTAGGTCAAGATAA 6783 0.4053 MDLKIPIDDQFSKLHPSLPLSTRIGIVGAGPSGLSAAYALSRLGYNNVTVLEKHHTVAGMCESVEIEGKIYDLGGQVLAANSAPVIFHLAKETGSELEEMDSHKLALIDPYSGKFQDVNVADDYVSVMTLTLDIQEKVKNSKHFGIHAVSQVASDLTTDYLESHGLKSVPKSVAYGYTASGFGFVQDLPYAYIHEFTRTSMAGKIRRFKGGYTSLWKKIAESLPIKLHCNTQVLAIRRSSESVKVTVKRLNENEKTMEFDKIIISGNFPLRYGRTYRSVPSAFTESEEEVMDATELERDLFSKVETFDYYTTVFKIKGFEHLPIGFFYFSEYMEDPNTIGNPVAMQKFYDDSDIFLFWSYGNSSDIKGPTVIELAIKAVESMGGKIDKFILQRRFKYFPHVNSQDMKSGFYEKLESELQGSRNTYYVGGLMAFELTERNSSYAMALMCKNFATSSDLPMFPYTKSLFPLQTEFQKKEPRELGELPGVQFPNLPSLNSYLKHWGTHPITQNRTLYSWINEEGEVVCTRSYGEQNSNASCIAQNLLSCRKPIIKPGDKVLLVYVPGLDFVDAFFGCIRAKVIPVPVLPPDPMQKSGQALVKIDNIAKSCGIVAILSTKGYHSAVRAGFVKGLISLSGKDGKSSARWPNLPWMHTDSWIDKSKSLASKYVDDQCEAQPGDICFLQFTSGSTGDAKGVMITHGGLVHNVKLMRGRYKSTSRTMLISWLPQYHDMGLIGGLFTALVSGGSAVLFSPITFIKKPLLWLETMSKYQATHTPGYGLAENCVFVSCAFGQSNPILVDWQGRICCGYVQPGDADVDIRIVDPESGEELQEDGKEGEIWISSQSSGIGYWGKDELSQKTFRNELPNHPGRNFTRTGDLGRIIDRKLFITGRIKDLIIAAGRNIYSSDVEKTVENSSEYLRPGCCAVIGVPEEILSAKGIALPDGSDQVGLVVIAEVKDGKSVSKDVIEHIQTRVIEEHGVSVASVKLIKPRTISKTTSGKIKRFECLKQFADETLNLVPQPLLTKKKLVRSFTTGTCKDGRTPRSNVAKNNLGTSQRISNKEIVEFLKKLISEQAGIPESDISVTDNITSFGVDSIGVVKASQKLSDFLGVPVAAIDVFTTSCIQELANFSENLLFKSKPQLVSNPSNASEEDIEIAELVMDVSKTHQWGIRLLQLLALFYITLMLVFPAYISITAFLSFNQSISALVEGISWSNYLISLTLAPLSWILCIASTSICISIFGNSFLRPNYALVPEISIHSMDFIKWWTHYKTQEIASRVLGVHLRGTTFLKYWFEMLGARIGSSVLLDTVDITDPSLVSIGDEAVIAEGVLVQSHEVKNRILSFNPIRIGKSSSVGPYAVIQKGSVIKDGAEVQPLQKVEKGQHVLKPTKLNNVKESATMLITTDKNEASAIYQLMGIYVVGFVSALAAAITYFLYTRLFQKPTSLQHFSFMCISGAFHWIPFTIIAYATMLSEFPSSAIVFTISLACAYLLHGLILSILTCFFIRLLHGQKQNHFKTWLRNQLSLSCHLRFAKLLTGTEAFCVYLRLLGAKIGKHCSIRAINPVSNPELMAIGNGVHLGDFSRIITGFHYSNGYTCGKIEVQDNSVVGSQSIILPGSHVEKNVILGALSIAPMNSILHEGSMYIGSQTRVITKKPTSGLDERIEEMDMAYKKVVSNLSANLATTTMNAKARYFHRIGVSGKGYLKMYDKIDGIPMHKIFHPGKSYPILIRHSNSLSADDDARIDARGASLKILSDEPASNNALFDLTLKTGKAFYARTLADFASWFVCGLAAREELVKKFPHLREAVWNSLRNANSYAELHYYSNICRLLRFNDGQEMYVKFKLRPYDKSIGENTGMVKPIGILPPETGAIPRDENDKRPLLFLADDFKNRVSSPGGVHYVFQIQVRPVPDDEATRDVALDCTRPWDENDFPYIDVGEINITENLSKEESDMCEFNPYLKSHELDVIPATSNSQSASMDHGRSLIYEICQYVRNKRPLPESWRNLIEQSVVKVDLSCCPMAAAASLPKKQPQKVTLTRTWYQTFSALFIQPFLQTVLPHAVIGLSIYAPLCCIVYLKNANGFPLHWMLPIFWILSGVMAALACVIAKWILVGRRKVGETIPLWSIRIIMDSTWQAIRTLIGDYFMDMTSGSFLFMVWMKMMGASIDIMDDGAYIDSSMGSLLNPEMVKIEGGGCVGREALLFGHIYEGDEGGIVKFGEIKIGEDGFVGSRAVVMPGVHVENEGNLSALTLAMKGEIIRSR 2260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01875 2260 ProSiteProfiles catalase family profile. 1622 2260 IPR018028 GO:0004096|GO:0006979|GO:0020037
Aip03g01875 2260 ProSiteProfiles Carrier protein (CP) domain profile. 1060 1134 IPR009081 -
Aip03g01875 2260 Gene3D Catalase core domain 1652 2002 - -
Aip03g01875 2260 SUPERFAMILY Trimeric LpxA-like enzymes 2160 2248 IPR011004 -
Aip03g01875 2260 SUPERFAMILY Acetyl-CoA synthetase-like 504 1017 - -
Aip03g01875 2260 Gene3D - 1049 1133 IPR036736 -
Aip03g01875 2260 SUPERFAMILY Trimeric LpxA-like enzymes 1285 1383 IPR011004 -
Aip03g01875 2260 Pfam AMP-binding enzyme 525 774 IPR000873 -
Aip03g01875 2260 Pfam AMP-binding enzyme 775 896 IPR000873 -
Aip03g01875 2260 Gene3D - 23 446 IPR036188 -
Aip03g01875 2260 ProSitePatterns Putative AMP-binding domain signature. 681 692 IPR020845 -
Aip03g01875 2260 Pfam Flavin containing amine oxidoreductase 32 266 IPR002937 GO:0016491
Aip03g01875 2260 PRINTS Adrenodoxin reductase family signature 23 45 - -
Aip03g01875 2260 PRINTS Adrenodoxin reductase family signature 47 60 - -
Aip03g01875 2260 Gene3D Hexapeptide repeat proteins 1295 1409 - -
Aip03g01875 2260 Gene3D - 94 202 - -
Aip03g01875 2260 PANTHER AMINE OXIDASE 1 773 - -
Aip03g01875 2260 SUPERFAMILY ACP-like 1059 1140 IPR036736 -
Aip03g01875 2260 SUPERFAMILY Trimeric LpxA-like enzymes 1544 1663 IPR011004 -
Aip03g01875 2260 PANTHER AMP-BINDING ENZYME 774 2260 - -
Aip03g01875 2260 PANTHER AMP-BINDING ENZYME 1 773 - -
Aip03g01875 2260 ProSitePatterns Phosphopantetheine attachment site. 1089 1104 IPR006162 -
Aip03g01875 2260 SUPERFAMILY Heme-dependent catalase-like 1687 1996 IPR020835 GO:0020037
Aip03g01875 2260 PANTHER AMINE OXIDASE 774 2260 - -
Aip03g01875 2260 SUPERFAMILY FAD/NAD(P)-binding domain 22 272 IPR036188 -
Aip03g01875 2260 Pfam Phosphopantetheine attachment site 1065 1129 IPR009081 -
Aip03g01875 2260 SMART Phosphopantetheine attachment site 1063 1134 IPR020806 GO:0031177
Aip03g01875 2260 Gene3D - 892 1019 IPR045851 -
Aip03g01875 2260 Gene3D - 483 891 IPR042099 -
Aip03g01875 2260 Gene3D - 304 397 - -
Aip03g01875 2260 CDD FAAL 500 1011 IPR040097 GO:0008610
Aip03g01875 2260 Gene3D Hexapeptide repeat proteins 1538 1651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01875 Aip-Chr3 24257132 24265247 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01875 646 1007 Monolignol Biosynthesis Gene Families AT1G20480 24.362 1.42e-12 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01875 - - vvi:100253550 3004.16