Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01873 ATGGACTCCGTGGCCGGCGCTACGTCGCCCACCACCTCCGCAACTGCCGCTCCGCCGCGCCCGCCTCCGACGTCGTCGTCTCCGTTCCCCGGCCGAGAAGACTGCTGGAACGAGGAAGCCACCTTCACCCTCATCGACGCCTGGGGCGACCGTTACCTTGAACTCAACCGTGGTAACCTCCGTCAGAAGCACTGGCAGGAGGTCGCCGATGCCGTCAACGAACTCCACGCCGGAGACGGCGGCGCCGTCCTAGGTGGAACGTCCACTACCACAACCAAGCGAACTCGCCGGACCGATGTTCAGTGCAAGAACCGAATCGACACGCTGAAGAAGAAGTACAAGATCGAGAAGGCTAGGGTTTCCGAATCCGGCGGCAGTTACCAGAGCCCCTGGCCTTTCTTCTCCCGCCTCGACAACCTGATCGGAGATACTTTTCCGGTCAAAAAACTCTCGCCGCCGGCTACCGGCCGGGGAACCCCTCCCTCCGCCGCCAAACTCTCACCGCTTCCGCCGCCGGCGTGGATAATCTCTCACCCCGTAGGTCCCCGATCCGGAACTCAGAAACGTACGGCGGCGGTTCCGACGACGGCGCCGGCTAACCGGGAAGATTCCTACTTCCGGCGGAATTTCTCAGCCTTCGCAGCCGCAGCGGCTGCTGCAGCAGAAGCCAAGAGTGGAGATTCCGATGGCTGGAGGTCCAGCAGCGACGGCGGCGATGGTGGTGGAAGACGGAGGAAGACGGGGGAAATTGAGATGAAATGCTGGGAAGTTGGGTATAGGGAACTTGCTCAGGCGATTGAGAAGTTCGGAGAGATATATGAGAGAGTTGAAGCTTCGAAGCAGAGGCAGATGGTGGAGTTGGAGAAGCAGAGGATGCAATTTGCAAAAGATTTGGAGTACCAAAGGATGCAGCTTTTCATGGAGACGCAGGTTCAGTTTCAGAAAATCAAACGCGCAAAACGCACTTCTGACAGTTTCTCATAG 984 0.5894 MDSVAGATSPTTSATAAPPRPPPTSSSPFPGREDCWNEEATFTLIDAWGDRYLELNRGNLRQKHWQEVADAVNELHAGDGGAVLGGTSTTTTKRTRRTDVQCKNRIDTLKKKYKIEKARVSESGGSYQSPWPFFSRLDNLIGDTFPVKKLSPPATGRGTPPSAAKLSPLPPPAWIISHPVGPRSGTQKRTAAVPTTAPANREDSYFRRNFSAFAAAAAAAAEAKSGDSDGWRSSSDGGDGGGRRRKTGEIEMKCWEVGYRELAQAIEKFGEIYERVEASKQRQMVELEKQRMQFAKDLEYQRMQLFMETQVQFQKIKRAKRTSDSFS 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01873 327 Pfam Myb/SANT-like DNA-binding domain 33 140 IPR044822 -
Aip03g01873 327 Gene3D - 36 115 - -
Aip03g01873 327 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 17 325 IPR044823 -
Aip03g01873 327 MobiDBLite consensus disorder prediction 148 200 - -
Aip03g01873 327 MobiDBLite consensus disorder prediction 1 33 - -
Aip03g01873 327 PANTHER SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR 17 325 - -
Aip03g01873 327 MobiDBLite consensus disorder prediction 224 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01873 Aip-Chr3 24232109 24234857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01873 31 318 Trihelix Transcription Factor Family AT3G14180 32.778 1.58e-44 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aip03g01873 Myb_DNA-bind_4 1.7e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01873 - - lang:109355153 374.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01873 03 24232109 24234857 Aip03g01873 03 24232109 24234857 ECH