Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01863 ATGTTGAACAACAAGGATTCCCCAGATGCAGATGCTCCTTGTGAAGTAAACAATAATGATGATCCTCAATCATCAGCAAGATCCCAACATCATAACAATGATGATGAAATTGCACCTCTTTCACCATCAATTTTCAATGTTACCCCAATTGATGAAGAAGGTGATTATCTGCCTCCATTTTTCTCTCCTCTACCATCAATTGTTGACTCATTTGGGGAATACAACATGAACACATCACCTCAATATGATCTTGAACTCAACCCTCCATACCAATACCTTGGTTGGAATGATATGGACAACATCTTTACTACTATTCCATTGTTTCAACCACCTCCTCCATCTTGGATTGTTTCTCCCAAAGATGAAACTACTACTTTTCATGGAGATTGTGTTGGGGAGGACATTATTAACAGTAGCCAACCAAATCATGATCATTTTCATCGTCAAGATTCAAGTACTAACAACGATGAACAAAAGAGCAACTCTGAGCTTGAGCTTGAAGTTGAGCTTCGATCTAAACTCGAACTCGAACCCGAAAAATCAAGTTATGACCCTCCTTTTCATCAGTATTCAAGTAACCCTAACCCGAGTGGCCACAACAATGATGAAGAACCAAAGAATCAGCTTGAGCCTGAAATTGAGTCAGAATCTGTACTTGTAGATAGAAATAATAATATCCCATTGCACTCGTTGCCTCTTGTTGATGACAACAAAGAATCAAGTGATAAACCTCCTTTTCATCGGTATTCTACCCTCTCATCCCCATCAATGTTGCTGCCTTTGGTTGATTATAGTGATGATGACGAAGAATCAAGGGATGATGATCAATCTTCTCCTCGTCGAGAAAACATTACCCTCTCTTCATTGTTTCCTCTGGTGGTTTATAGTAGTAGTGACCAAGAAGATCAAGAATCAACAAGTGATGATGATAAGCCTTCTTATCAAAACCCTTCAACAAAACTTGATGCTGTTTCTTCTTCAAGTGTTGTTGAGGTTGCACCTTCTCTTGCTCCTCCTTCCATTGTTATGCCTGGTTCATCATCAAGTTCAGGTGCCAATACGGTTGTTAGTGCTCTTCCAACGCCTTCTGCCATTGTTGTTCCATCTTCTTCTTCTTCATGTGCTTCTCATCCTCCTCAAAACAACAATAAACAAACAGCTATATCTGTGAATCAATCAAAGTACTATAAAAGGAAGAGGAATCAGAGTAAAGAAAAAATGGTTAATGAAGGTAGTGATGATGATGTTAATAACGTTGTTGGATTCAGAAAAGGGGTTCCAACCGTTTCTGAAATGGATTTGCTCCAAGCATTTCTACATTTTGGAACCAATCACGACACTCTTTGGCCATTGATTATTAGAGTGAACGTAAAACAGGATGTTGTGGCAACATTGAAATTAATAGCCGAAGAAAAACAACTAAATCTTCTGATTGTTGGTACAGTTGGTACCTTTTCACTTGTTGAGCTTCTGCACCAAGGAAACCCTGCAACTTTTGAGGGAAATTTTAGTATTATCTCATTGTCTGGCGGTATATTTGTTCAAAAGAAGAATGGTGAGAAGACAGAAACTACAACTCAATTATCTGTTTCAGTTGTTGGTGCTGATGGCAAGGTTTTTGGAGGACCTGTTCATGGAAGATTAATTGCATCATCTCCTATGCAGACGATTGGTTTAACTATGGCTAGAAAAGTAGGGCACAAGACAAGAAGCCCAGGGGCAAAAATAACAATTCCAAAGCTGCAGATGCTTATTAAATCCATCAAAGATAGAGCAAAAGCTGACAAGGCAAATGCCAGAGATATTCCTGAATCATCGCAAAAAGAAGAAGCAACAAATTGTGGAAGTGATTTGTGTGATATGGAGGTTAAAATGGTTGATATGAATATATGA 1893 0.3862 MLNNKDSPDADAPCEVNNNDDPQSSARSQHHNNDDEIAPLSPSIFNVTPIDEEGDYLPPFFSPLPSIVDSFGEYNMNTSPQYDLELNPPYQYLGWNDMDNIFTTIPLFQPPPPSWIVSPKDETTTFHGDCVGEDIINSSQPNHDHFHRQDSSTNNDEQKSNSELELEVELRSKLELEPEKSSYDPPFHQYSSNPNPSGHNNDEEPKNQLEPEIESESVLVDRNNNIPLHSLPLVDDNKESSDKPPFHRYSTLSSPSMLLPLVDYSDDDEESRDDDQSSPRRENITLSSLFPLVVYSSSDQEDQESTSDDDKPSYQNPSTKLDAVSSSSVVEVAPSLAPPSIVMPGSSSSSGANTVVSALPTPSAIVVPSSSSSCASHPPQNNNKQTAISVNQSKYYKRKRNQSKEKMVNEGSDDDVNNVVGFRKGVPTVSEMDLLQAFLHFGTNHDTLWPLIIRVNVKQDVVATLKLIAEEKQLNLLIVGTVGTFSLVELLHQGNPATFEGNFSIISLSGGIFVQKKNGEKTETTTQLSVSVVGADGKVFGGPVHGRLIASSPMQTIGLTMARKVGHKTRSPGAKITIPKLQMLIKSIKDRAKADKANARDIPESSQKEEATNCGSDLCDMEVKMVDMNI 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01863 630 MobiDBLite consensus disorder prediction 126 212 - -
Aip03g01863 630 CDD DUF296 450 551 IPR005175 -
Aip03g01863 630 MobiDBLite consensus disorder prediction 1 42 - -
Aip03g01863 630 MobiDBLite consensus disorder prediction 281 301 - -
Aip03g01863 630 MobiDBLite consensus disorder prediction 230 327 - -
Aip03g01863 630 Pfam Plants and Prokaryotes Conserved (PCC) domain 450 557 IPR005175 -
Aip03g01863 630 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 377 586 IPR039605 GO:0003680
Aip03g01863 630 MobiDBLite consensus disorder prediction 367 392 - -
Aip03g01863 630 MobiDBLite consensus disorder prediction 185 202 - -
Aip03g01863 630 MobiDBLite consensus disorder prediction 140 182 - -
Aip03g01863 630 MobiDBLite consensus disorder prediction 310 327 - -
Aip03g01863 630 SUPERFAMILY AF0104/ALDC/Ptd012-like 448 559 - -
Aip03g01863 630 Gene3D - 451 582 - -
Aip03g01863 630 ProSiteProfiles PPC domain profile profile. 445 584 IPR005175 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01863 447 557 AT-hook Motif Nuclear Localized (AHL) Family AT5G51590 31.579 1.11e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01863 - - sly:101253210 75.0997