Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01862 ATGCGTCCACCATTTAGGAGTAGAGTCAGGTTTCAAATAGGGCAGAAAGTGGAGGTGTGTGGTAAAGAAGAAGGGTTTTTTGGTTCTTATTATGAAGCCACCATTGTTTCATGCCTTGGTAATAGCTGCTACCTTGTCCAATATAAAAACCTTCTAAGTGCTAGTGAGCCTAATAAGCCTCTCGTTGAGATGGTGAAACTTAAGGACCTTCGCCCTATTCCATTGGAAGATCTTGGATCTCATGAATTCATTGTTAATCAAAATGTTGATGTATTTGCCAATGATGGTTGGTGGGTTGGAAAAATTACCAGTAAGAGGGGTTCGAGATATTCTGTGTATTTTTCTTCCACAAATGAGGAGATTGTTTATCCTTCTTCCCAAATTAGGGTTCACATAGATTGGATTGATGGGTCGTGGGTATATCAGGATACAAATCAACAATGA 444 0.3941 MRPPFRSRVRFQIGQKVEVCGKEEGFFGSYYEATIVSCLGNSCYLVQYKNLLSASEPNKPLVEMVKLKDLRPIPLEDLGSHEFIVNQNVDVFANDGWWVGKITSKRGSRYSVYFSSTNEEIVYPSSQIRVHIDWIDGSWVYQDTNQQ 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01862 147 Gene3D - 1 83 - -
Aip03g01862 147 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 8 145 - -
Aip03g01862 147 Pfam Agenet domain 87 129 IPR008395 -
Aip03g01862 147 Pfam Agenet domain 14 74 IPR008395 -
Aip03g01862 147 SMART agenet_At_2 81 136 IPR014002 -
Aip03g01862 147 SMART agenet_At_2 9 78 IPR014002 -
Aip03g01862 147 PANTHER - 8 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01862 Aip-Chr3 23920053 23920525 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01862 23 143 PHD Transcription Factor Family AT5G58610 28.000 1.96e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01862 - - adu:107478234 295.434