Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01847 ATGGCACAATTGCCGCCAAAGATTCCAAACATGGCAAGTAATAATTGGCCTGAGTTTTCATCAAATCAAAATCATCATCACCAAAAGATGCCTTCTCTCACAAGCATTTCAACAAACACAAACCGCGCCCAAAACCAACAACAGCAGCAAAACCCTTCCTGGGTTGACGAGTTTCTGGACTTCTCGTCGGCGAGGCGCGGGGCCCACCGACGATCCATGAGCGACTCCATTTTCGTGGAGTCGCCGAGGCACATTAACAACAGCAGCAGCAACGGCGACGGCGGCGGCGAAGACGAGTTTGAGAGGTTTGATGATTATCAATTCATGAACATGTTCAGTGATGAGGTAGTTTCCGGCGACACAAACAACAAAGAGATCAATAAGGATGATGATCATCATGATCATGATCATGATCAGCAACAAGTGAAGGTAGAATCCGATGAAGATGAAAGCCAATGCAACAATAAAGCTCTGGATAATGATGATGATAGCAGTAAGAATAACAATAATAACTCCAATGCAAATGCTGCTACTACAAATTCCAGTGAAAAAATTACAGACCCCAAGAGGGTAAAAAGGATTTTGGCTAATAGACAATCAGCACAAAGATCAAGAGTGAGGAAGCTGCAATACATATCAGAGCTTGAGCGCAGCGTAACTTCATTACAGGCGGAAGTTTCAGTATTATCACCGCGGGTGGCATTTTTGGATCACCAACGTTTGCTTCTAAATGTTGATAACAGTGCTCTCAAGCAAAGAATCGCAGCTTTGGCACAGGACAAGATCTTCAAAGATGCTCACCAAGAAGCACTGAAAAGGGAGATAGAGAGACTAAGGCAAGTGTATCACCAATTAAACGTGAAGAAGAATATGGAAATTGCTTCAGCCACAGTGTCACCTTCAATATCTCCATCTTCAACCAGACCACGTTGTGATACTCAGAATAATGAAAAGGAACAGCTTATCAATGTTTGA 975 0.4318 MAQLPPKIPNMASNNWPEFSSNQNHHHQKMPSLTSISTNTNRAQNQQQQQNPSWVDEFLDFSSARRGAHRRSMSDSIFVESPRHINNSSSNGDGGGEDEFERFDDYQFMNMFSDEVVSGDTNNKEINKDDDHHDHDHDQQQVKVESDEDESQCNNKALDNDDDSSKNNNNNSNANAATTNSSEKITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQLNVKKNMEIASATVSPSISPSSTRPRCDTQNNEKEQLINV 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01847 324 SUPERFAMILY Leucine zipper domain 189 243 IPR046347 GO:0003700|GO:0006355
Aip03g01847 324 MobiDBLite consensus disorder prediction 62 77 - -
Aip03g01847 324 Gene3D - 188 260 - -
Aip03g01847 324 MobiDBLite consensus disorder prediction 121 163 - -
Aip03g01847 324 MobiDBLite consensus disorder prediction 118 190 - -
Aip03g01847 324 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 1 118 - -
Aip03g01847 324 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 123 322 - -
Aip03g01847 324 CDD bZIP_plant_RF2 190 240 IPR044759 GO:0003700|GO:0006355
Aip03g01847 324 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 192 207 IPR004827 GO:0003700|GO:0006355
Aip03g01847 324 Pfam bZIP transcription factor 189 233 IPR004827 GO:0003700|GO:0006355
Aip03g01847 324 Coils Coil 268 288 - -
Aip03g01847 324 MobiDBLite consensus disorder prediction 297 324 - -
Aip03g01847 324 SMART brlzneu 185 249 IPR004827 GO:0003700|GO:0006355
Aip03g01847 324 MobiDBLite consensus disorder prediction 1 100 - -
Aip03g01847 324 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 187 239 IPR004827 GO:0003700|GO:0006355
Aip03g01847 324 MobiDBLite consensus disorder prediction 8 57 - -
Aip03g01847 324 MobiDBLite consensus disorder prediction 164 184 - -
Aip03g01847 324 MobiDBLite consensus disorder prediction 79 94 - -
Aip03g01847 324 PANTHER BASIC LEUCINE ZIPPER 34 1 118 - -
Aip03g01847 324 PANTHER BASIC LEUCINE ZIPPER 34 123 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01847 Aip-Chr3 23462897 23465792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01847 1 266 bZIP Transcription Factor Family AT3G58120 53.548 1.59e-89 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aip03g01847 bZIP_2 3.5e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01847 - - ahf:112737744 510.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01847 03 23462897 23465792 Aip03g01847 03 23462897 23465792 ECH