Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01845 ATGGAATCGCATTTCTTCCTCCTCCGATGTTTTCTCCTCCTAGCTTCTGCCGCATGTTCTCTTTCCCACCCTTCTCTCCTCGGTGTTCACCCTCTAGATGAGAAATATTACAGCTCTGAGGTAATCAAGTGCAAGGATGGATCAAAATCCTTCCCCAAAGATCGTCTCAATGACAATTTCTGCGATTGCCCTGATGGCACTGATGAACCAGGAACTTCAGCTTGCTCAGCTGGAAAATTTTATTGCAGAAACCTGGGAAGCAAGCCACAATTTATATTCTCTTCTCATGTTAATGATCTTTTCTGTGATTGTTGTGATGGGAGTGATGAATATGATGGACACATTCGGTGCCTCAACACTTGTGTAATGGGTGGGAATGCCAAAATTGGCAATTACAATTCAAAACTGAGTCAGCAGGCCTCTTTTGCTGGAAAAGTGACCAAAGATGAAGTGAAGTTGGAGGACTTGGTTCATAATCTTTTGAGTTTGAGGTTAGCAATTATTCTACAAGTGGTTCTGCTTGCTTTTATGGTATTTCTATGGCGTTTTGGTTGCCGTTCCAGATCTAAAAGGAGGCGTACAATTGAACTGAAAGAGATCTAG 603 0.4229 MESHFFLLRCFLLLASAACSLSHPSLLGVHPLDEKYYSSEVIKCKDGSKSFPKDRLNDNFCDCPDGTDEPGTSACSAGKFYCRNLGSKPQFIFSSHVNDLFCDCCDGSDEYDGHIRCLNTCVMGGNAKIGNYNSKLSQQASFAGKVTKDEVKLEDLVHNLLSLRLAIILQVVLLAFMVFLWRFGCRSRSKRRRTIELKEI 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01845 200 Pfam Glucosidase II beta subunit-like 15 123 IPR028146 -
Aip03g01845 200 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 14 193 IPR039794 -
Aip03g01845 200 PANTHER EXPRESSED PROTEIN 14 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01845 Aip-Chr3 23416230 23421808 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01845 26 136 Calmodulin-binding Proteins AT5G56360 66.071 3.71e-47 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01845 - - aip:107647257 343.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01845 03 23416230 23421808 Aip03g01845 03 23416230 23421808 ECH