Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01844 ATGCATCCAGCATGTGCGGCATGCAAACATCAAAGGAAGAAATGCAGTGAGAATAATTGCATATTAGCCCCTTATTTTCCAGCAAATAGAAGCCGTGAGTTCCATGCAGTGCACAAAGTTTTTGGTGTTAGCAACATAACTAAGTTAGTGAAGAGTGCAAAGGAAGAAGATCGAAGAAGAGTTGTTGACTCATTAATTTGGGAAGCATGTTGTAGGCAAAGAGACCCTATTCATGGTCCTTATGGAGAGTACACAAAAGTTTACAATGAGTATAAGAAAGTGTTTAATGAACTTAAGATATTTAGGGGCCAAAATACTAATACTAATCCTAATAATAATAATCATCATCATCAACTATTGCAAATGCCATTACCATCATCTCATCATCAAGGACTAAAATCCGTACAAGATTTGATTATGTGCAATAATAATAATAATAATACTAATAATGGGAATAAAGGGAAACACAAAGGTGAAGAAGTTGATAGTAATAATACTAATAATAACAATAATGGTAAAAACTCATTGGAATATCATCATGTTCATCATGATGAGAACAAGAATGAGATTATGGACTCTTCTACTACTATTTATAATGCATATTGTTCAAATTATTTGCATGATTTGGATAATATGATGAGGCAGGAGGTTGTCATCCCATTTCAGCAGCACTCTCAAACATACTATATTACAGGTAAGTCTTGA 705 0.3333 MHPACAACKHQRKKCSENNCILAPYFPANRSREFHAVHKVFGVSNITKLVKSAKEEDRRRVVDSLIWEACCRQRDPIHGPYGEYTKVYNEYKKVFNELKIFRGQNTNTNPNNNNHHHQLLQMPLPSSHHQGLKSVQDLIMCNNNNNNTNNGNKGKHKGEEVDSNNTNNNNNGKNSLEYHHVHHDENKNEIMDSSTTIYNAYCSNYLHDLDNMMRQEVVIPFQQHSQTYYITGKS 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01844 234 Pfam Lateral organ boundaries (LOB) domain 4 100 IPR004883 -
Aip03g01844 234 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 2 229 - -
Aip03g01844 234 PANTHER LOB DOMAIN-CONTAINING PROTEIN 2 2 229 - -
Aip03g01844 234 MobiDBLite consensus disorder prediction 146 176 - -
Aip03g01844 234 ProSiteProfiles LOB domain profile. 3 105 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01844 Aip-Chr3 23412304 23413008 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01844 2 92 AS2 family AT1G06280 61.538 1.32e-38 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aip03g01844 LOB 9.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01844 - - ahf:112769909 426.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01844 03 23412304 23413008 Aip03g01844 03 23412304 23413008 ECH