Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01833 ATGGAATCCAATGATGGTGAGGATCATTCTCAAAAATTGCTTTTAGCTCAAACCCACATATGGAATCACTTTTTTAGCTTCATAAATTCTATGTCCCTTAAATGTGCAATTGAACTGAACATACTTGATGTTGTTCACAATTATGGCCAACCCATGCCACTCTCAGAACTCATTGCTTCATTACCAATCCAACCGTCAAAAGCCGCCTTCGTCCCCCGCTTGATGCGAATCTTGACACTTTCCGGCTTCTTCTCGAATCAAAATGATGATGATCAACAAGAAGAGAGGTATGTTCTAACTAATTCATCTAGACTATTGCTAAAGGATCACCCCTTTTGCATGACACCATTCCTGGATGTACTTCTTGATCCAAATTTGGTAAAACCATGGTACCAACTCTCTAATTGGTTCAAGAAATGTGACACTAACAAGTCACCATTAGAAATGGAACATGGGAGGGCATTTTGGGAATTTGCTAGTCATGACCAAAAGCTTAGTAATAGTTTCCATGAGGCCATGACAAGCGACTCTAGATTGATTGCTAGTGTGGTGATTGAGAAGTGTAAGGATACTTTTGAAGGGTTGGAATCTTTGGTTGATGTTGGTGGGGGCAATGGAACTATGGCTAAGGCCATAGCTAAATCATTCCCAAATGTGGAGTGCATTGTGTTTGATCTTCCACATGTTGTTGCTGGCTTTCAAGGAAGTAGTGACAAGAACATCAAATATGTTGGAGGGGACATGTTTGAGGCAATTCCTTCTGCAGATTCTGTTTTGTTGAAGTGCATATTACACAACTGGAGTGATGAGGATTGTGTAAAACTCCTGAAGAAATGCAAGGAGGCAACAATGAAGAAGGGCAAAAAAGGAAAAGTGATAATAATAGACATGGTGGTAGGGAATGAGAATGGAGATAATGGATCACTGGAGACACAACTTTATTATGATATGGCGATGATGGCCTTTGTCACTGGAAAGGAGAGAACTGAGAAAGAATGGGCCAAGCTATTTTTCTCTTCTGGTTTCAGTAATTACAAGATAATTCCAATTTTGATGAGTTCAAGGTCTTTGATCGAGGTTTATCCATAG 1089 0.3985 MESNDGEDHSQKLLLAQTHIWNHFFSFINSMSLKCAIELNILDVVHNYGQPMPLSELIASLPIQPSKAAFVPRLMRILTLSGFFSNQNDDDQQEERYVLTNSSRLLLKDHPFCMTPFLDVLLDPNLVKPWYQLSNWFKKCDTNKSPLEMEHGRAFWEFASHDQKLSNSFHEAMTSDSRLIASVVIEKCKDTFEGLESLVDVGGGNGTMAKAIAKSFPNVECIVFDLPHVVAGFQGSSDKNIKYVGGDMFEAIPSADSVLLKCILHNWSDEDCVKLLKKCKEATMKKGKKGKVIIIDMVVGNENGDNGSLETQLYYDMAMMAFVTGKERTEKEWAKLFFSSGFSNYKIIPILMSSRSLIEVYP 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01833 362 PANTHER O-METHYLTRANSFERASE 6 362 IPR016461 GO:0008168
Aip03g01833 362 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Aip03g01833 362 SUPERFAMILY "Winged helix" DNA-binding domain 10 111 IPR036390 -
Aip03g01833 362 Pfam O-methyltransferase domain 130 343 IPR001077 GO:0008171
Aip03g01833 362 Gene3D Vaccinia Virus protein VP39 108 362 IPR029063 -
Aip03g01833 362 Gene3D - 2 106 IPR036388 -
Aip03g01833 362 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 362 IPR016461 GO:0008168
Aip03g01833 362 PIRSF O-mtase 1 362 IPR016461 GO:0008168
Aip03g01833 362 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 360 IPR029063 -
Aip03g01833 362 PANTHER ORCINOL O-METHYLTRANSFERASE 6 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01833 Aip-Chr3 23108599 23110952 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01833 31 348 Monolignol Biosynthesis Gene Families AT5G54160 33.642 3.19e-50 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01833 - K16040 gmx:100807238 458.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01833 03 23108599 23110952 Aip03g01833 03 23108599 23110952 ECH