Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01819 ATGGCTAAATTGATCCAGTTGGGTACTCTTGATTTGAGCTATAATGAAATGTCTGGTGAAATTCTGGGTTGGATTAGCGGTTTGAATAGACTCAATGAGCTTAATTTGGCACATAATAGGTTTAGTAGCACAATTCCAAAGGAATTAGGAAGGTTGTCTGAGCTCACTGTCCTTGATCTTTCTAGTAACCAATTTTCTGGTGAGATTCCTCTAGAGCTGGAGAATCTGAAGCTCAATAAGTTCAATTTGTCATACAATCGGCTTTCTTGGGATGTTCTGCCTCATTATGCCACTAAGAATTATGAAATATGTTTTGTAGGAAACCCTGAGCTTTGTGTTAAAGGATTTGGGAAATGTCATAGCTCAAGGGGTAGAAAGTACCGGAGGTATGCATGGATTTTCAGGTCCATATTTGCAGTTGCTAGAATCTTGTTCATCCTTGGGGTGGCTGTGTTTTATGTGAGATACAGGAACTTAAGAAAGAAGAAGAGAAGTTTAAATGTTTCAAAATGGAGGTCGTTTCATAAGCTAGGCTTTGATGAGTTTGAGATTGTGAAATTGATGAGTGAAGACAATGTGATAGGGAGTAGATCATCTGGGAAGGTTTACAAGGTTGTTCTAAGCAGTGGTGCTGTTGTGGCCGTCAAGAAATTATGGAGAGAAACCAAGGATGGAATTGGGATTGTTGGTTCTGAAAAAGATGAATTTGATGTTGAAGTTGAAACACTAGGAAAAATAAGGCACAAAAATATAGTAAGGTTGTGGAGTTGCTACAACAGTGGTGACAGCAGGCTCCTGGTTTATGAATATATACCGAATGGGAACTTGGCCGATATGTTGAAGAGTAACAAGAAAAGCTTGTTGGATTGGCCAACAAGGTACAAGATTGCAATTGATGCTGCTGAGGGGCTTTCTTATTTGCATCATAGGGATGTAAAATCGAACAACATATTGCTCGACAGTGAGTTTGGAGCAAAAGTGGCTGATTTTGGAGTTGCCAAAATTGTTAATGGAACTAGCCAAGGGGCGGTGTCCATGTCTGTAATTGCAGGCTCTTATGGTTACATCGCACCAGAATATGCATATACTCTTCGGGTGAACAAAAAGAGTGATATTTACAGCTTTGGTGTTGTCATTTTGGAGTTAGTAACCGAAAGACCTTCTAATCATGCAGATTACGGGGAAAATGATATGGTAAAATGGGTCTCATCCTTGTTGGAACAGAAAGGAATGGATCATGTGATTGATCCTGCCCTTGATTCAACATACAGGGAGGAAATCAGCAAGGTACTTAGTGTGAGGTTTCTCTGCACAAACGTTCTCCCTATAAACTGCCCTGCAATGTGGTGGGTGGTGAAAATGCCTCGGGAAGCAGCAACGGTTCCCAGATCCCGAAGAATGAGGGAGGTAACACACTCCCCTTATTTTGATAGAGATTTCTTATCGTGA 1449 0.4065 MAKLIQLGTLDLSYNEMSGEILGWISGLNRLNELNLAHNRFSSTIPKELGRLSELTVLDLSSNQFSGEIPLELENLKLNKFNLSYNRLSWDVLPHYATKNYEICFVGNPELCVKGFGKCHSSRGRKYRRYAWIFRSIFAVARILFILGVAVFYVRYRNLRKKKRSLNVSKWRSFHKLGFDEFEIVKLMSEDNVIGSRSSGKVYKVVLSSGAVVAVKKLWRETKDGIGIVGSEKDEFDVEVETLGKIRHKNIVRLWSCYNSGDSRLLVYEYIPNGNLADMLKSNKKSLLDWPTRYKIAIDAAEGLSYLHHRDVKSNNILLDSEFGAKVADFGVAKIVNGTSQGAVSMSVIAGSYGYIAPEYAYTLRVNKKSDIYSFGVVILELVTERPSNHADYGENDMVKWVSSLLEQKGMDHVIDPALDSTYREEISKVLSVRFLCTNVLPINCPAMWWVVKMPREAATVPRSRRMREVTHSPYFDRDFLS 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01819 482 ProSiteProfiles Protein kinase domain profile. 188 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g01819 482 Gene3D Ribonuclease Inhibitor 2 127 IPR032675 -
Aip03g01819 482 Pfam Protein kinase domain 190 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g01819 482 PANTHER RECEPTOR-LIKE PROTEIN KINASE 5 2 461 - -
Aip03g01819 482 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 2 461 - -
Aip03g01819 482 Gene3D Transferase(Phosphotransferase) domain 1 271 472 - -
Aip03g01819 482 SUPERFAMILY Protein kinase-like (PK-like) 188 455 IPR011009 -
Aip03g01819 482 ProSitePatterns Serine/Threonine protein kinases active-site signature. 307 319 IPR008271 GO:0004672|GO:0006468
Aip03g01819 482 SUPERFAMILY L domain-like 3 94 - -
Aip03g01819 482 Gene3D Phosphorylase Kinase; domain 1 170 270 - -
Aip03g01819 482 SMART serkin_6 188 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01819 Aip-Chr3 22750235 22752101 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01819 5 95 Receptor kinase-like Gene Family AT1G28440 31.967 4.37e-06 47.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aip03g01819 Pkinase 4.1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01819 - - aip:107632602 954.896