Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01787 ATGGGTTTGCTTTCATCTTCTTATTCTTCTTCTTCTTTCACCACTTTTGTTCTATTCCTCTTTCTTGTACAATTATCTTGCTTCTTCAAAAACCTTAATGCAAAGCATAGTGTGGCCAATGGTCAGAACCGGGGTGGCCACCATCACCACCACAACACCCGGAATCCGAGGCTTGATGGCGCCTTTCTTGCGCTGCAAGCATGGAAGAGTGTCATCTATTCCGACCCAAAAAACTTCACTGGCAACTGGGTAGGTCCTAGAGTTTGCAATTACACAGGTGTGTATTGTGCTCCATCACAAGATGACCCTAAAGTGACAGTTGTAGCAGGCATTGACCTTAACCACGGCGACATAGCCGGCTTCCTACCGGCCGAATTAGGCCTGCTTTCAGACCTTGCTCTGCTCCATCTCAACAGCAACCGCTTCTGCGGCATCCTCCCAAGAACACTAAGCAACCTCAGTCTCCTTCACGAGCTTGATCTTAGCAACAACAGATTTGTTGGACCTTTTCCAACGGTTGTTCTTTCCCTTCCTTCCCTCAGATACCTTGACATTCGGTTCAACGAATTCGAAGGCTCATTGCCTGTTGATCTCTTTAACAAAACCTTTGATGCAATATTTCTCAATAACAACCGTCTTAGCAGTTCCATCCCACGAAGCTTCGGCCGAATCTCGGCCTCTGTCCTGGTTTTCGCCAACAACAGATTCGGAGGCTGTCTTCCAGAAAGCATAGTAAACTTAGCTGAAACACTGGAAGAGCTTGTCATGATCAACACCAGTTTACAAGGTTGTTTGCCACAGCAAGTTGGATTTCTCTACAAATTAAGAGTATTTGATGTTAGTTTCAACAAAATTGTTGGCCCAATTCCTTATAGCCTTGCAGGGCTTTCTCATTTGGAGCAGCTCAATTTGGCACACAATATGATGACCGGCATAGTCCCTATGGGAGTTTGTGAGCTTCCCAACTTGGCCAATTTCACATTTTCTTATAACTTCTTCTGCGAGGAAGAGGGAATTTGCCGGAACTTGACATCAAAAAGAACTGTCTTTGATGATCGCCGCAACTGTTTGCCGGAGAAACCGCTACAGAGGAGCAAGAAGGAGTGCAATGCTGTAAATCAGAACCCTGTTGATTGCATAAAACTTTGTTGTACCACAGAAGGTGGTTTTGGAAACAATGTCACAAGTTCTAGCTCAATGCCAACAATGCCTATTTCTGCACCTCCTTTTATTGCACCAAGCCACCCATGA 1251 0.4516 MGLLSSSYSSSSFTTFVLFLFLVQLSCFFKNLNAKHSVANGQNRGGHHHHHNTRNPRLDGAFLALQAWKSVIYSDPKNFTGNWVGPRVCNYTGVYCAPSQDDPKVTVVAGIDLNHGDIAGFLPAELGLLSDLALLHLNSNRFCGILPRTLSNLSLLHELDLSNNRFVGPFPTVVLSLPSLRYLDIRFNEFEGSLPVDLFNKTFDAIFLNNNRLSSSIPRSFGRISASVLVFANNRFGGCLPESIVNLAETLEELVMINTSLQGCLPQQVGFLYKLRVFDVSFNKIVGPIPYSLAGLSHLEQLNLAHNMMTGIVPMGVCELPNLANFTFSYNFFCEEEGICRNLTSKRTVFDDRRNCLPEKPLQRSKKECNAVNQNPVDCIKLCCTTEGGFGNNVTSSSSMPTMPISAPPFIAPSHP 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01787 416 Pfam Leucine rich repeat 132 189 IPR001611 GO:0005515
Aip03g01787 416 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 8 415 - -
Aip03g01787 416 SUPERFAMILY L domain-like 63 349 - -
Aip03g01787 416 Gene3D Ribonuclease Inhibitor 62 351 IPR032675 -
Aip03g01787 416 PANTHER EXTENSIN-LIKE PROTEIN 8 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01787 Aip-Chr3 22176824 22178074 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01787 55 408 Trihelix Transcription Factor Family AT2G15880 52.542 3.63e-136 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01787 - - adu:107478209 759.985