Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01786 ATGGAGCACGCATCTAATAATGGAGGTAGAAATGGCAGTTCAGACGGTGGCACAAGAGAAGTGCGACTACCGGATCTTGAAGTGAATGATAAAATGGAAGAAAGAGTATTCTTTGATGAGATGATAGAAAAGTCAGATGATACAGAGAAATTTCAAGGAATGTATCAAGATGAAATTGAGCAGGAAGCGGTGAATTCTGAGGATTTAGGGAAGCAAGAATTTCAAGCAATGTTTGATGGGAACGGTTTTTCACATGAGATAACATTTGATTTCTATAACCATTATACAAAATTTGTTGGTTTTGGTGCTAGAAAAAGTAAGACTTGGAAAAATAGCAAAGGAGAATATGTGAAGCAATTTTTTGTGTGCTCTCGTGAGGAATTTAGACCAGAGAAATATTATAATATAGAAAATAGAAAAAGGGAGCCAAAATCTGAGACTCGTTGTGGTTGCCTGGCTAGGTTTGTAGTTCGTTTTGTGGCTTACACTGGAAGATGGCATTTGGCTTTGTTTGTTGAATTGCACAATCATGATTGCCTTGATTCTATGGATATGTATAATGAGATTGCTAGGCAAAGGCGTCATGTCCTAGATTATGAAGTATTTGGAGATGTGCTTGCCTTTGATGTGACATACAAGAAGAACAAGTACTTGTGTCCGGTAGTAGTGTTTTCCGGTGTGAATCATCACAACCAAACAATGGTATTTGGAAGTGCTCTAGTTACCAATGAGAGTAAGGAGGTCTACGTGTGGTTATTACAACAACTATTGGCAGCCATGAAGGGAAAAGCACCTGTATCTGTGATTACAGATGGTGCTCCATCAATGAGGTTTGCAATTGAGGCGCATTTTAAGCGGTGTCTTACCTACCTAAGATATAAGGAGGTTGAAGCTGACTATGTTTCCATATCTGGTCTTTCGGTACTTAAAACAGCATTAGAACCTCTGGAAAGGATGGATTCTTTTGGAATTCCGTGTGAGCATATAGTTTGTGTGCTAGTGTTTCTTAACATCCTTGAGCTGCCAAAGTCTCTTGTGTTGAAAAGGTGGTCGAAGAATGCCAAGACAAGCACTTTCGATTCAAGTGGCGTTACTTGGGAGTCTATAATATTGAGTCAATATGGATGCTTGATGGATTGGTGTCGGCAACTATCCTATGTCGCTAGTCGAAGGCAGGAGGGATTCAACCTTGTTCGAGACACTGTTATGAGCCTAATCGAAGATTTCGAGATTAAAGATGAACAAGAAAAGCAAGTTGGTGCTGAAGCTAATGATTCAGATGGTATTTTTCCTAAGAATCCACAAAATTGTAGGTCTAAGTGTCATCCAGGTGAAAAGGACATTCAGCAGACCAATGCAAGTTGTGCAACTTTTTGTGGCATAAATAGGAACCCTTTTGAGGAAGGTTTGGATGCAGATGCAGAAATGGGATTTTGGGCATCTGATATTGAAGAAGATTATGAAGATCAAGAGTTTTGGGCAGGAGGTTCTGATGCAAGTGCCGACATGGAACTTAGTGAAGAGTTCTCCCAGAAGTTACCATATCTGATAATTTTAAAGCCTGAAAATTATATTCATGACAAGATTGTTAAGGTTCATGTATTATTTTACATGTGTATAAAGAAATGGATTAAGGATACCTCACCAAGGATTTCATAA 1659 0.3888 MEHASNNGGRNGSSDGGTREVRLPDLEVNDKMEERVFFDEMIEKSDDTEKFQGMYQDEIEQEAVNSEDLGKQEFQAMFDGNGFSHEITFDFYNHYTKFVGFGARKSKTWKNSKGEYVKQFFVCSREEFRPEKYYNIENRKREPKSETRCGCLARFVVRFVAYTGRWHLALFVELHNHDCLDSMDMYNEIARQRRHVLDYEVFGDVLAFDVTYKKNKYLCPVVVFSGVNHHNQTMVFGSALVTNESKEVYVWLLQQLLAAMKGKAPVSVITDGAPSMRFAIEAHFKRCLTYLRYKEVEADYVSISGLSVLKTALEPLERMDSFGIPCEHIVCVLVFLNILELPKSLVLKRWSKNAKTSTFDSSGVTWESIILSQYGCLMDWCRQLSYVASRRQEGFNLVRDTVMSLIEDFEIKDEQEKQVGAEANDSDGIFPKNPQNCRSKCHPGEKDIQQTNASCATFCGINRNPFEEGLDADAEMGFWASDIEEDYEDQEFWAGGSDASADMELSEEFSQKLPYLIILKPENYIHDKIVKVHVLFYMCIKKWIKDTSPRIS 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01786 552 Pfam MULE transposase domain 205 286 IPR018289 -
Aip03g01786 552 PANTHER OS03G0181600 PROTEIN 193 283 - -
Aip03g01786 552 PANTHER OS03G0181600 PROTEIN 318 409 - -
Aip03g01786 552 PANTHER OS03G0181600 PROTEIN 84 181 - -
Aip03g01786 552 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 193 283 IPR031052 GO:0006355
Aip03g01786 552 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 318 409 IPR031052 GO:0006355
Aip03g01786 552 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 84 181 IPR031052 GO:0006355
Aip03g01786 552 MobiDBLite consensus disorder prediction 1 23 - -
Aip03g01786 552 Pfam FAR1 DNA-binding domain 90 180 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01786 Aip-Chr3 22141239 22144336 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip03g01786 FAR1 1.6e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01786 - - adu:110280242 460.685