LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip03g01759	ATGTCTTCCCTTCTCATATATCTCTTCCTTCTGAGAATAACCTTAGTTTCTTCGTCAACAGAATTTGTCTACAACACCAACTTCAACTCCACCAACATAAATCTCTATGCAAACGCCACTATTGATGATCACTCTCACTCTTCAATTCTCACCCTTACCAACCATGCCTCTTTCTCTATTGGCCGTGCTTTCTACCCTTCCAAGATCCCAACAAAATCTTCCTTTTCTTCCAACCCTTTACCGTTCTCAACCTCCTTTATCTTCTCCATTGCACCATTCAAGCACCTTCTCCCTGGCCATGGTTTTGTGTTCTTGTTCTCACCTTTTGAAGGAGCAAACGGGGTTAGCTCAGCTCAGCACCTTGGCCTCTTCAACTTGACCAACAATGGTAACCCCAAAAACCATGTTTTTGGGATTGAGTTTGATGTGTTCAAGAACCAAGAATTCAATGACATCAATGATAACCATGTGGGTTTGGATGTGAATTCTCTTACTTCTTTGGCCTCACACGATGCTGGATTTTGGGTCAGTGGAAAACATGATGAAAAGTTTAAGGAATTGAAGCTTAACAATGGGCAACTTGTTGAGAGTCACAAGATTTTGGCATGGAGCTTTAGCAACTCAAATTTTTCGATCGGCGATGCTTTGGTGACTACGAATTTGCCTTCATTTGTGCTTCCAAAAGACCCAGTTTTGAAGTCAAGAGGTTTTGTTTCAGGTATCAGTTTTGGGATTTTTATCTTTGTTATTGGTAGTGCAGCTATGGTGTTTGTTGTTTTGCTCAAAAGAAAAAGAAGCAAAAGAATGGAGGAAGAGGGAGATATTGAAGACTGGGAATTAGAGTATTGGCCACACCGTATTAGTTATGAAGACATTTATGCTGCAACTAAAGCATTTTCAGAACAGAATATAATTGGGTTTGGAGGGAATGGAAAAGTTTATAAAGGGATTCTACAAGGAGTAGAAGTAGCAGTGAAAAGAATCCCTTATGACAGTGAATATGGTATGAGGGAGTTTTTATCTGAGATTTCAAGCTTAGGAAGATTGAAGCATAGGAATGTGGTTCCATTGAGGGGTTGGTGTAAGAAAGAGAGAGGAAGCTTGATCCTAATTTATGATTATATGGATAATGGAAGTTTGGACAAGATAATATTTGATTCTGATGAGAACTCAATTTTCCATTGGAAAAACAGAATGAAGGTGCTGAAGGATGTGGCTATGGGGATATTGTATTTGCATGAGAGTTGGGAAGTTAAGGTGTTGCATAGGGACATAAAAGCAAGCAATGTGTTACTTGACAAGGATATGAATGCAAGGTTGGGGGATTTTGGACTCGCCCGGATGCATCATCATGAGCAGATACCTAACACCTCTCGAGTGATCGGAACGGTTGGCTACATGGCACCGGAACTGCTAAGAACCGGGAGAGCCTCGACGCAAACTGATGTGTTCAGCTTCGGCGTGTTGGTTCTAGAGGTTGTGTGTGGGAGAAGGCCTATAGAAGAGAATAAGCCAGCATTGGTTGGTTGGGTGTGGAGGCTAATGGAGAGAGGAGAGTTGTGTTGTGCTCTTGATGAAAGATTGAAAATGAGGGGTGATGAAGATTATAGCATTGATGAAGTTGAGAGAGTTCTTCATCTTGGTTTGTTGTGCACACATTATGATCCTCAAGTTAGGCCAAGTATGAGGCAAGTTGTGAAGGTTTTGGAGGGTGAGAGTTTGGAAATAAGCTTAGTTGATAAAATAAATTCCGCTGCTGATGGATATAGTGGGGTTCACCCCACCATTGAAGATATATCTCAATGTTCTTTCACAACTCAATGTGAGGGCAGATGA	1836	0.4118	MSSLLIYLFLLRITLVSSSTEFVYNTNFNSTNINLYANATIDDHSHSSILTLTNHASFSIGRAFYPSKIPTKSSFSSNPLPFSTSFIFSIAPFKHLLPGHGFVFLFSPFEGANGVSSAQHLGLFNLTNNGNPKNHVFGIEFDVFKNQEFNDINDNHVGLDVNSLTSLASHDAGFWVSGKHDEKFKELKLNNGQLVESHKILAWSFSNSNFSIGDALVTTNLPSFVLPKDPVLKSRGFVSGISFGIFIFVIGSAAMVFVVLLKRKRSKRMEEEGDIEDWELEYWPHRISYEDIYAATKAFSEQNIIGFGGNGKVYKGILQGVEVAVKRIPYDSEYGMREFLSEISSLGRLKHRNVVPLRGWCKKERGSLILIYDYMDNGSLDKIIFDSDENSIFHWKNRMKVLKDVAMGILYLHESWEVKVLHRDIKASNVLLDKDMNARLGDFGLARMHHHEQIPNTSRVIGTVGYMAPELLRTGRASTQTDVFSFGVLVLEVVCGRRPIEENKPALVGWVWRLMERGELCCALDERLKMRGDEDYSIDEVERVLHLGLLCTHYDPQVRPSMRQVVKVLEGESLEISLVDKINSAADGYSGVHPTIEDISQCSFTTQCEGR	611

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip03g01759	611	SMART	serkin_6	299	569	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aip03g01759	611	SUPERFAMILY	Concanavalin A-like lectins/glucanases	20	208	IPR013320	-
	Aip03g01759	611	PANTHER	-	8	193	-	-
	Aip03g01759	611	CDD	STKc_IRAK	305	571	-	-
	Aip03g01759	611	ProSitePatterns	Protein kinases ATP-binding region signature.	305	326	IPR017441	GO:0005524
	Aip03g01759	611	ProSiteProfiles	Protein kinase domain profile.	299	596	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aip03g01759	611	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	420	432	IPR008271	GO:0004672\|GO:0006468
	Aip03g01759	611	Gene3D	Phosphorylase Kinase; domain 1	259	374	-	-
	Aip03g01759	611	CDD	lectin_legume_LecRK_Arcelin_ConA	20	208	IPR001220	GO:0030246
	Aip03g01759	611	PANTHER	-	192	574	-	-
	Aip03g01759	611	Pfam	Protein kinase domain	300	567	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aip03g01759	611	Pfam	Legume lectin domain	20	193	IPR001220	GO:0030246
	Aip03g01759	611	PANTHER	L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.1	8	193	-	-
	Aip03g01759	611	PANTHER	L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.1	192	574	-	-
	Aip03g01759	611	Gene3D	-	17	194	-	-
	Aip03g01759	611	Gene3D	Transferase(Phosphotransferase) domain 1	375	584	-	-
	Aip03g01759	611	Coils	Coil	261	281	-	-
	Aip03g01759	611	SUPERFAMILY	Protein kinase-like (PK-like)	277	570	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip03g01759	Aip-Chr3	21775788	21777785	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip03g01759	18	523	Receptor kinase-like Gene Family	AT4G04960	56.206	0.0	591

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Aip03g01759		Pkinase	7e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip03g01759	-		-	adu:107478122	1198.73