Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01758 ATGGGTTGTACATGTTCAAAGAGTTCGACCATAGAAGACTGTAGGGAATGGATCACAAACAAATTATCATGTTGCACCAGAACATTAGACCTAAATATTTCACATTTGAATTCCTCGAAGAGGGTTGGGGGTGTTCGGGTTACAGATAAGTCACTGGATGATTATGATGTGAAAGTTTCATCAATTGATAAGGAAGACAATAATTCAATTCAGCCATATGATGATCAAACTGGGAAGGATTGGCTTTCTTCTGTTGCTGGTGAAGCTATTAAAGGATGGATTCCAAGGAGCGCAAATACTTTTGAAAGGTTACATAAAATTGGGCAAGGAACTTATAGTACTGTTTATAAGGCACGTGATGTAACTAATCAAAAGATTGTTGCACTGAAGAAGGTATATTTTGACAGTTTTAACCATGAGAGCATTAAGTTTATGGCAAGGAAAATCCTTATTCTGCGTAGGCTCAACCATCGAAACATAATAAAGTTGGACAGCTTGATAACATCACAAACATCCCACAGCTTATACCTTGTTTTTGAGTATATGGAATATGATCTTAAAGGACTTGCATCAAATCCAGCCATTAAATTCTCTGAATCACAGGTTGAGCAGATACATCGGATTTTTAAACTTTGTGGTTCCCCATCTGATGATTATTGGCTAAAATTGTCGTTGCCACTTTCAATGCTCATAGAGACTCTACTATCTATTGATCCAACACATCGAGGGACAGTTGCCGCTGCTCTCAGAAGTGAGTTCTTTATATTAGAACCTCTGCCTTGTGATCTATCAAGCTTATCAAAATATCCTCCCAACAAAGAAATCAACGCCAAATTGCAAGATGAAGCAAACAAAAGTCCGCCGCCGTCAACAGTTCTCCTCCTCCACCTCTCGCCGGAGCTCGCTGGTGGCTCGTCGGACCTCTACCTCTTCGAGTCTTCACTTTGA 948 0.3977 MGCTCSKSSTIEDCREWITNKLSCCTRTLDLNISHLNSSKRVGGVRVTDKSLDDYDVKVSSIDKEDNNSIQPYDDQTGKDWLSSVAGEAIKGWIPRSANTFERLHKIGQGTYSTVYKARDVTNQKIVALKKVYFDSFNHESIKFMARKILILRRLNHRNIIKLDSLITSQTSHSLYLVFEYMEYDLKGLASNPAIKFSESQVEQIHRIFKLCGSPSDDYWLKLSLPLSMLIETLLSIDPTHRGTVAAALRSEFFILEPLPCDLSSLSKYPPNKEINAKLQDEANKSPPPSTVLLLHLSPELAGGSSDLYLFESSL 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01758 315 PANTHER CELL DIVISION PROTEIN KINASE 230 284 - -
Aip03g01758 315 PANTHER CYCLIN-DEPENDENT KINASE 201 229 - -
Aip03g01758 315 PANTHER CYCLIN-DEPENDENT KINASE 80 202 - -
Aip03g01758 315 Gene3D Transferase(Phosphotransferase) domain 1 193 289 - -
Aip03g01758 315 PANTHER CELL DIVISION PROTEIN KINASE 80 202 - -
Aip03g01758 315 PANTHER CELL DIVISION PROTEIN KINASE 201 229 - -
Aip03g01758 315 ProSiteProfiles Protein kinase domain profile. 101 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g01758 315 ProSitePatterns Protein kinases ATP-binding region signature. 107 130 IPR017441 GO:0005524
Aip03g01758 315 PANTHER CYCLIN-DEPENDENT KINASE 230 284 - -
Aip03g01758 315 Pfam Protein kinase domain 101 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g01758 315 Gene3D Phosphorylase Kinase; domain 1 95 192 - -
Aip03g01758 315 SMART serkin_6 101 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g01758 315 SUPERFAMILY Protein kinase-like (PK-like) 95 283 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01758 Aip-Chr3 21757332 21761560 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01758 198 286 Core Cell Cycle Gene Families AT5G10270 28.696 3.41e-09 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Aip03g01758 Pkinase 3.6e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01758 - K08819 adu:107478228 348.591