Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01747 ATGAATATTCTCATATTTGTGCAAACTCCAGTCGAAGACAGAATATTCACACATATTGTTTATGCTCCTGATACTGATACTGATACCATACTTAAACCACATCTTAATCCCAATTCTAAGTTCCTACCACTTGAGTTAGAAGATGATGAAGTACTAGTTGGATTCCAAAGGCTTTCTTCTGTTGCTGGTGAAGCTATCAAGGGATGGATACCAAGGAGCGCAAATACTTTTGAAAGGTTACATAAAATTGGGCAAGGAACTTATAGTACTGTTTATAAGGCACGTGATGTGACTAATCAAAAGATTGTTGCGTTAAAAAAGGTACATTTTGACAGTCTTAACCCTGAGAGCATCAAGTTTATGGCAAGAGAAATCCTTATTCTTCGTAGGCTCAACCATCCAAACATAATAAAGTTGGATAGCTTGATAACATCAGAGACATCCCACAACTTGTACCTTGTTTTTGAGTATATGGAACATGATCTTAAAGGACTTGCATCAAATCCTGCCATTAAATTCTCTGAACCACAGCTAAAATGCTACATGCAACAACTTCTTAGTGGATTGGATCATTGTCATAGTCATGGTGTCATCCATCGTGATATAAAGGGATCAAATATTCTCATTGACAACAATAATGTCTTAAAGATTGCAGATTTTGGTTTGGCAAGTTTTTTTGACCCCCATCATAGTATTCCATTGACAAGACGTGTTGTAACTCTTTGGTATAGACCACCAGAACTTTTACTCGGAGCAAACCATTATGGGGTTGCTGTAGATTTATGGAGCACTGGTTGCATATTAGGAGAACTATATAGTGGCAGACCTATATTGCCAGGAAAAACCGAGGTTGAGCAGATACATCGGATTTTTAAACTTTGTGGTTCCCCATCTGATGATTATTGGATGAAATTGCGGTTGCCACTTTCAACAGTATTTAAGTCTCCACACCATTATAGGAGATGTATTGCAGACACATTCAAGGATTATCCACATGCTGCTGTGAAGCTTATAGAGACTTTATTATCTATTGATCCAACACACCGAGGGACAGCTGCCGCTGCTCTCAAAAGTGAGTTCTTTACATTAGAACCTCTGCCTTGTGATCCATCAAGCTTACCAAAATATCCTCCCAGCAAAGAAATCGACGCCAAATTGCGAGATGAAGCAAACAGAAGGCAGTGTTATGCTGGAGATAGGGAGAAAAAAATTGACTCAAGAATTAGACAAGTATCAAAGGCATATGTCACGTCAAAAGACAATATTGGTTCAAAAACATCAATACAGCAAGTACAACGATATTCATTTACAAAGAATCGAAGTGAAGTCTCCAACTCTCATAGAGAATATGTGTCCAAACAACTAATTTACCTACCTAAACATTCAGAAGATGCTAAAGAAACCGAAAACAATCACTCTGGGCATATCCATAGGAGGCCTTTGCATATAGGTCCATTGGTTCATGTTAGTTCTGGTTGGGCAACAAGTGGAAATAAAATTGATGATGAGCCTCTTATTTCGCACAGAATAGATCATATGAAACTATCTAGACTTGCTGCTTCCATGGTTTCAACACTCACAGATAGCCTTATGCTTGAAGATGTAGCCCTATTCACTACTGTAGAAGGCCTCACCGATGTTGGTTTTGAATTAACTGGATTTAAAGGCCTATATGTGGCTAATTTGGCCCTGTGCTATGGTGCATGTAGTCTGGTTGCTGCTACAGTTGGTCTAGTTGGTCTTTGTAATGCTCCTGGTGGTTTGAATGGTGCATAG 1776 0.3874 MNILIFVQTPVEDRIFTHIVYAPDTDTDTILKPHLNPNSKFLPLELEDDEVLVGFQRLSSVAGEAIKGWIPRSANTFERLHKIGQGTYSTVYKARDVTNQKIVALKKVHFDSLNPESIKFMAREILILRRLNHPNIIKLDSLITSETSHNLYLVFEYMEHDLKGLASNPAIKFSEPQLKCYMQQLLSGLDHCHSHGVIHRDIKGSNILIDNNNVLKIADFGLASFFDPHHSIPLTRRVVTLWYRPPELLLGANHYGVAVDLWSTGCILGELYSGRPILPGKTEVEQIHRIFKLCGSPSDDYWMKLRLPLSTVFKSPHHYRRCIADTFKDYPHAAVKLIETLLSIDPTHRGTAAAALKSEFFTLEPLPCDPSSLPKYPPSKEIDAKLRDEANRRQCYAGDREKKIDSRIRQVSKAYVTSKDNIGSKTSIQQVQRYSFTKNRSEVSNSHREYVSKQLIYLPKHSEDAKETENNHSGHIHRRPLHIGPLVHVSSGWATSGNKIDDEPLISHRIDHMKLSRLAASMVSTLTDSLMLEDVALFTTVEGLTDVGFELTGFKGLYVANLALCYGACSLVAATVGLVGLCNAPGGLNGA 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01747 591 SMART serkin_6 77 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g01747 591 Pfam Protein kinase domain 77 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g01747 591 Gene3D Transferase(Phosphotransferase) domain 1 160 400 - -
Aip03g01747 591 PANTHER CYCLIN-DEPENDENT KINASE 57 528 - -
Aip03g01747 591 PANTHER CELL DIVISION PROTEIN KINASE 57 528 - -
Aip03g01747 591 SUPERFAMILY Protein kinase-like (PK-like) 70 367 IPR011009 -
Aip03g01747 591 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524
Aip03g01747 591 Gene3D Phosphorylase Kinase; domain 1 64 159 - -
Aip03g01747 591 CDD STKc_CDK9_like 77 361 - -
Aip03g01747 591 ProSiteProfiles Protein kinase domain profile. 77 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g01747 591 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01747 Aip-Chr3 21523521 21531010 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01747 69 402 Core Cell Cycle Gene Families AT5G10270 46.571 4.11e-107 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Aip03g01747 Pkinase 6.6e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01747 - - adu:107478228 907.131