Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01740 ATGATGAATGGGACGACGACGAAGGCCTTGAGTGCCATAAGGGCCGTGAATCCGGGGGAAAAAAGTGTAGGGGGTGCCGTCGATGGTAACAGGTCGGCTGGTGCAGATGATATGACAGAGGGTGGTCTCAGCCGTCCAGTCGGTGCGCAAGACTTCTTGGGAAAAGAGTTTGCAACAGAGGAGGATGCTTATGCTGCATACAAGGAGTTTGCTAAATTAAGGGGTTTTGGAGTTCGAAAAGATGTAGCTTGTGTGAATGGGGTGTTGATTAGGAGAGATTTTTTCTGCCATCGACAAGGTACAAGACATCCTAAACACTATGACCGTCCTGAGGGAGTAAGTGAGGAAAGGTTGGAGAGTCGCATGGACTGTAAGGCAAAGTTGAATATTTACTATGATATGCAACATAGCGTATTGGAGAGGGTTTTTTTATTAACTTATACTCCACAACAACTTCATTAA 462 0.4567 MMNGTTTKALSAIRAVNPGEKSVGGAVDGNRSAGADDMTEGGLSRPVGAQDFLGKEFATEEDAYAAYKEFAKLRGFGVRKDVACVNGVLIRRDFFCHRQGTRHPKHYDRPEGVSEERLESRMDCKAKLNIYYDMQHSVLERVFLLTYTPQQLH 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01740 153 Pfam FAR1 DNA-binding domain 67 132 IPR004330 -
Aip03g01740 153 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 49 134 IPR031052 GO:0006355
Aip03g01740 153 PANTHER PROTEIN FAR1-RELATED SEQUENCE 11 49 134 - -
Aip03g01740 153 MobiDBLite consensus disorder prediction 21 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01740 Aip-Chr3 21411634 21412095 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip03g01740 FAR1 2.2e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01740 - - aip:107632719 213.001