Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01707 ATGGGGTGTTGTGTCTCAACTAGTAGTAAGAGTACTTGTAGCAGCCGGAGCAATGGAGAGATGGCGAATCCATCATGCTTAGAAATCGGATGCTGTGTGCATAAGAAAGCAAGGAGAACCTTCTCTGATCATGTTATTTCACTACACCATTTGGCGTCGTTGCCGAGCAGGATTTTCACTAATGGAAAGAGTAGAGCTTCTTGCATATTTACGCAGCAGGGCCGCAAAGGGATCAATCAGGATGCAATGATTGTGTGGGAAGATTTTATGTCTGAAGATATGACCTTTTGTGGTGTCTTTGATGGCCATGGTCCACATGGTCATCTCGTTGCGCGCAAAGTGAGGGACGCCTTGCCTTTGAAACTGCTCTCATTTCTGCATTCTTCTGAATCGAAGCGAAACGGATCAGGTAAAGCTTGCTTCAAGGGGAATGTAAAACCGGACAATGGAGACTCTCAGAAGGATTTATCAGCCGAGGATAAACTGAATTCAACGTGGAGAGAGGCTTTCATGAAGGCATATAAGTCTATGGACAAAGAGCTCAGGTCTCATCCGAATTTGGACTGCTTTTGTAGTGGGAGCACGGCTGTCACTATAGTGAAGCAGGGCTCAAATTTGTTCATGGGATATATCGGGGATTCTCGAGCAGTGATGGGATCCAAGGACAGCAATGACTCCATGGTGGCAATTCAGTTGACCATTGATTTGAAGCCCGATTTGCCAAGAGAAGCAGAAAGAATTAAACGGTGCAAGGGAAGGGTGTTTGCTTTGCAAGATGAGCCTGAGGTGCCAAGGGTATGGTTGCCTTTTGATGATGCACCGGGATTAGCAATGGCTAGAGCATTTGGAGATTTCTGCTTGAAGGAGTATGGTGTGATTTCCATACCTGAATTTTCTCACCGGCTGCTTACTGACAAAGATCAGTTTGTTGTTCTTGCCTCAGATGGTGTCTGGGATGTTTTAAGCAATGAAGAGGTGGTTGAGATAGTATCTTCGGCACCAACACGGTCATCAGCCGCAAGGATTCTGGTAGATGCTGCAGCCCGGGAGTGGAAACTTAAGTATCCGACTTCAAAGATGGACGACTGCGCCGTGGTCTGCCTATTTTTGGACGGTAAAATGGACACAGAATCCGACTATGACGAACAAGGCTTCTCTTCTGCAACCCTCCAGAGCAATCATTCTGGAAACCCGGTCGAGTCAGACGACGGACTAAAATCCGAGCCATCTTTGCAGAGGAACTTCACAGTTAGATCCTCAGAGGAAAATGAGCCTAATAACGGAGTACAATCCATTGATGTTGAAGATGGAGCATCATCAGCTGATGATCAAAATTGGTCAGGTTTGGAGGGTGTTACTCGTGTGAACTCATTGGTCCAACTACCTAGATTCTCAGAGGAAAGGCCAAAATCATGA 1416 0.4619 MGCCVSTSSKSTCSSRSNGEMANPSCLEIGCCVHKKARRTFSDHVISLHHLASLPSRIFTNGKSRASCIFTQQGRKGINQDAMIVWEDFMSEDMTFCGVFDGHGPHGHLVARKVRDALPLKLLSFLHSSESKRNGSGKACFKGNVKPDNGDSQKDLSAEDKLNSTWREAFMKAYKSMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMGYIGDSRAVMGSKDSNDSMVAIQLTIDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDKDQFVVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVDAAAREWKLKYPTSKMDDCAVVCLFLDGKMDTESDYDEQGFSSATLQSNHSGNPVESDDGLKSEPSLQRNFTVRSSEENEPNNGVQSIDVEDGASSADDQNWSGLEGVTRVNSLVQLPRFSEERPKS 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01707 471 MobiDBLite consensus disorder prediction 1 20 - -
Aip03g01707 471 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 459 - -
Aip03g01707 471 MobiDBLite consensus disorder prediction 408 452 - -
Aip03g01707 471 CDD PP2Cc 72 370 IPR001932 -
Aip03g01707 471 MobiDBLite consensus disorder prediction 380 452 - -
Aip03g01707 471 Pfam Protein phosphatase 2C 136 347 IPR001932 -
Aip03g01707 471 PANTHER ALPHABET, ISOFORM E-RELATED 1 459 - -
Aip03g01707 471 SMART PP2C_4 55 368 IPR001932 -
Aip03g01707 471 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
Aip03g01707 471 MobiDBLite consensus disorder prediction 381 400 - -
Aip03g01707 471 MobiDBLite consensus disorder prediction 130 156 - -
Aip03g01707 471 Gene3D - 59 378 IPR036457 -
Aip03g01707 471 SUPERFAMILY PP2C-like 58 372 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01707 Aip-Chr3 20693816 20698400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01707 1 471 PP2C-type Phosphatase Gene Family AT1G03590 67.983 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01707 - - adu:107477895 937.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01707 03 20693816 20698400 Aip03g01707 03 20693816 20698400 ECH
Aip08g00880 08 9636345 9638070 Aip03g01707 03 20693816 20698400 PCT