Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01696 ATGAATCCAACACCACCATTCCTTCTGTCTGATCGCGACGCTTCTCTTCGTCCCCCTCTTGGACTACAAAAGATTAGTATAAAGCTATCGTTCTACTCTATAGTTTTATGGTGGTGCAATGGGATTGAGTTCTTGCTGTTCATATATGGTGGGGCTCCATACCAGACTCAGGAGAGTAAGCTTAGGAGAGGTGTTGATATTGTTGTTGGCACTCCAGGTCGCGTGAAGGATCATATAGAGAGGGAAAATATTGACCTGATCCAGCTAAAGTTCCGTGTCCTTGATGAGGCTAATGAGATGCTCAGAATGAGTTTTGTTGAAGATGTGGAACTAATTTTAGGCAAGGTACAAGATGTTAGCAAAGTTCATACACTTCTTTTCAATACTACTTTGCCAGACTGGGTTAAACATATTTCTGGAAAATTTCTGAAACTAGATAAAAAAAATTGCAGATCTGGGCCCAGCTTATCCCAGACATTATACGCTGTTATAGTAGTGGAGGCCGAACAATTATATTTACTGAGAAAAAAGAGTCTGCTTCTGAGCTTGCCGGCTTGTTGCCTGGAGCAAGAGCTCTACATGGTGATATACAGCAATCACAACGTGAGGTTACACTGTCTGGTTTTAGgccggatgttcattttactagGTCGTGAAAGTGACGGGTGTGACTGA 675 0.4089 MNPTPPFLLSDRDASLRPPLGLQKISIKLSFYSIVLWWCNGIEFLLFIYGGAPYQTQESKLRRGVDIVVGTPGRVKDHIERENIDLIQLKFRVLDEANEMLRMSFVEDVELILGKVQDVSKVHTLLFNTTLPDWVKHISGKFLKLDKKNCRSGPSLSQTLYAVIVVEAEQLYLLRKKSLLLSLPACCLEQELYMVIYSNHNVRLHCLVLGRMFILLGRESDGCD 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01696 224 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 46 147 - -
Aip03g01696 224 Gene3D - 27 148 IPR027417 -
Aip03g01696 224 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 32 149 IPR014001 -
Aip03g01696 224 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 46 144 IPR027417 -
Aip03g01696 224 Pfam DEAD/DEAH box helicase 45 137 IPR011545 GO:0003676|GO:0005524
Aip03g01696 224 PANTHER DEAD (ASP-GLU-ALA-ASP) BOX HELICASE 21 46 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01696 Aip-Chr3 20474071 20475955 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01696 50 143 Eukaryotic Initiation Factors Gene Family AT1G72730 37.234 1.41e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01696 K16911 - nnu:104610854 166.777