Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01694 ATGCTGGGCACTGTGTATAGGGCAGAGCTTCCTAATGGGAAGGTACTTGCTGTGAAGAAGCTTGAAAAGAGAGTTTGTGATCACCAGAAGGAGGAGGATTTTCTTGAATTAGTGAATGGCATTGATAGAATACGACATGTAAATATCGTCGAGCTTATTGGGTACTGTTCGGAGCATGGTCAAAGGCTTCTGATATATGAGTATTGCAGTAATGGATCACTCTATGAGGCACTTCACTCAGAGGATGAATTCAAAACAAGACTCTCATGGAATGCTCGCATCCGGATAGCACTTGGGGCGGCTAGGGCCCTAGAGTATTTGCATGAGCAATGTATGCCAGCTGTGATTCACAGAAATTTCAAGTCTGCTAACATTCTTCTTGACGATGACCTATCAGTGCGTGTATCTGATTGTGGGTTGGCTCCATTAATAGCTTCAGGATCTGTCAGTCAGCTATCCGGACAACTGCTAACAGCTTATGGCTATGGAGCTCCGGAATTTGACTCAGGAGTTTACACATACCAAAGTGATGTTTACAGCTTTGGAGTAGTTATGTTAGAACTTTTGACTGGCCGTCAGTCCCATGACAGGAAGCGACCTCGAGGGGAGCAGTTTCTGGTCAGATGGGCAGTTCCCCAACTCCATGATATTGATGCATTGTCAAGCATGGTTGATCCTTCTTTGAGTGGAGAGTACCCCACCAAATCATTATCAAATTTCGCAGACATTATTTCTCGATGCCTTCAGTCGGAGCCAGAATTTAGGCCTGCAATGTCAGAGGTCGTCTTGTACTTATTGAACATGATCAGGAAGGAGTCCCAGCAAAGTGAATCAGATGAAATATGA 846 0.4456 MLGTVYRAELPNGKVLAVKKLEKRVCDHQKEEDFLELVNGIDRIRHVNIVELIGYCSEHGQRLLIYEYCSNGSLYEALHSEDEFKTRLSWNARIRIALGAARALEYLHEQCMPAVIHRNFKSANILLDDDLSVRVSDCGLAPLIASGSVSQLSGQLLTAYGYGAPEFDSGVYTYQSDVYSFGVVMLELLTGRQSHDRKRPRGEQFLVRWAVPQLHDIDALSSMVDPSLSGEYPTKSLSNFADIISRCLQSEPEFRPAMSEVVLYLLNMIRKESQQSESDEI 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01694 281 Pfam Protein tyrosine and serine/threonine kinase 3 263 IPR001245 GO:0004672|GO:0006468
Aip03g01694 281 Gene3D Transferase(Phosphotransferase) domain 1 69 281 - -
Aip03g01694 281 ProSiteProfiles Protein kinase domain profile. 1 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g01694 281 SUPERFAMILY Protein kinase-like (PK-like) 3 265 IPR011009 -
Aip03g01694 281 PIRSF ILK 3 279 - -
Aip03g01694 281 Gene3D Phosphorylase Kinase; domain 1 1 68 - -
Aip03g01694 281 PANTHER OS01G0253100 PROTEIN 1 279 IPR045271 GO:0004714|GO:0006468
Aip03g01694 281 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED 1 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01694 Aip-Chr3 20456615 20459000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01694 1 276 Strubbelig Receptor Gene Family AT4G03390 77.536 8.30e-160 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Aip03g01694 PK_Tyr_Ser-Thr 5.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01694 - - ahf:112737625 543.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01694 03 20456615 20459000 Aip03g01694 03 20456615 20459000 ECH
Aip08g00875 08 9568799 9573270 Aip03g01694 03 20456615 20459000 PCT