Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01674 ATGAAGATGGGTTCCTTCTTCATGAGGGCCTCCAATGCTCTCAAAGGCTACCCTTCATCCTCCAAGCTTCTTCTTCTCTGCACTCTCAGCATCAGTGGTGGAGGTGTAGTGGCATACTCAGAATCACGATCAGAAAGCGAACATCCTATTATTGATGCTCATGTAGCCCCAAAAAAGAAAGTAGTGGTTCTTGGAACAGGATGGGCTGGTACCAGTTTCCTTAAGGATCTGGATGCCTCACGATACGATGTTCAGGTTGTTTCGCCTCGGAACTACTTTGCATTCACTCCCTTGTTACCCAGTGTCACTTGTGGAACAGTTGAAGCTCGAAGCATCGTAGAGCCAGTTCGGACCTTAATAAAAAAGAATAAAGGTGAAATAAAATATTGGGAGGCAGAGTGTGTCAAGATTGATGCTGCAAACAGAAAGGTCTTTTGTAAAGACAATATCAACAACTTAGTGGGAAGGGGCGAATTTTCGTTGGACTACGACTTCTTGGTTTTAGCAGTAGGATCACAAGTAAATACTTTTAACACCCCTGGAGTGAAAGAGAACTGCCACTTTCTGAAGGATATCGAGGATGCTAAGAGGATCAGGCTGTCTATCACAGATTGCTTTGAGAAGGCTGTTCTTCCTAGTCTATCTGAAGAAGAGCGAAGGTCGAATCTTCATTTTGTAGTTGTTGGTGGGGGTCCAACTGGAGTAGAATTTGCTGCAGAGCTCCATGATTATGTCCAAGAAGATTTGACGAACTTATATCCAGCCGTTAAGGATTCGGTGAAGATAACATTGATTCAATCAGGAGATCACATCCTGAATACGTTTGATAAAAGAATAAGTACATTTGCTGAGCAGAAATTTTCAAGAGACGGTATAGAGGTTCAAACAGGATGTCGTGTCATCAGTGTTAGCGACAAGGAAATTACAATGAAGGTGAAATCAACAGGAGAGATATGCTCTGTGCCGCATGGATTGATTGTCTGGTCCACTGGCATTTCAACTATTCCTGTTATAAGGGACTTTATGGAACAAGTTGGTCAGGGTAAAAGACGTGTACTAGCAATCGACGAATGGTTGCGAGTAAAAGGATGTGAAGATGTGTATGCTGTTGGTGATTGTTGTACAATAGATCAACGAAAGATCATGGATGATATCTCAGCCATATTTGCGGCTGCAGACAAAAATAACTCCGGTACCTTAACCCTGGAAGAATTCCAAGATGTGATGGATGACATCTTATTAAGATATCCACAAGTTGAACTTTTTATGAAGAAAAAGCATCTTCTTGATTTCACCTCTCTGTGGTTAGATTCACAAGGGAATGAAAGAAAAGAGATAGACATAGAAGGGTTTAAGCAGGCTCTTTCTCATGCGGATTCACAGATGAAGAGTCTTCCAGCTACTGCACAGGTTGCTGCCCAACAAGGTACCTATCTAGCTAGATGCTTTAACCGCATGGATCAATGTGAAGAGAATCCTGAAGGTCCACGGCGATTTAGAGGAACCGGACGTCATAAGTTCCTTCCCTTCCGGTATAAGCATTTTGGGCAATTCGCACCGTTGGGTGGCGAGCAAGCGGCCGCAGAACTTCCCGGGGACTGGGTTTCCATGGGTCACAGCACTCAATGGCTCTGGTATTCTGTATATGCAAGCAAGCAAGTGAGCTGGCGCACAAGAGTATTGGTCATATCTGATTGGACTAGAAGATTCATTTTTGGAAGAGACTCAAGTCGTGTTTAA 1740 0.4333 MKMGSFFMRASNALKGYPSSSKLLLLCTLSISGGGVVAYSESRSESEHPIIDAHVAPKKKVVVLGTGWAGTSFLKDLDASRYDVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRTLIKKNKGEIKYWEAECVKIDAANRKVFCKDNINNLVGRGEFSLDYDFLVLAVGSQVNTFNTPGVKENCHFLKDIEDAKRIRLSITDCFEKAVLPSLSEEERRSNLHFVVVGGGPTGVEFAAELHDYVQEDLTNLYPAVKDSVKITLIQSGDHILNTFDKRISTFAEQKFSRDGIEVQTGCRVISVSDKEITMKVKSTGEICSVPHGLIVWSTGISTIPVIRDFMEQVGQGKRRVLAIDEWLRVKGCEDVYAVGDCCTIDQRKIMDDISAIFAAADKNNSGTLTLEEFQDVMDDILLRYPQVELFMKKKHLLDFTSLWLDSQGNERKEIDIEGFKQALSHADSQMKSLPATAQVAAQQGTYLARCFNRMDQCEENPEGPRRFRGTGRHKFLPFRYKHFGQFAPLGGEQAAAELPGDWVSMGHSTQWLWYSVYASKQVSWRTRVLVISDWTRRFIFGRDSSRV 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01674 579 PANTHER NADH DEHYDROGENASE 56 579 IPR045024 GO:0003954|GO:0006116
Aip03g01674 579 SUPERFAMILY FAD/NAD(P)-binding domain 224 390 IPR036188 -
Aip03g01674 579 ProSitePatterns EF-hand calcium-binding domain. 393 405 IPR018247 -
Aip03g01674 579 SUPERFAMILY FAD/NAD(P)-binding domain 58 276 IPR036188 -
Aip03g01674 579 SMART efh_1 384 412 IPR002048 GO:0005509
Aip03g01674 579 PANTHER EXTERNAL ALTERNATIVE NAD(P)H-UBIQUINONE OXIDOREDUCTASE B1, MITOCHONDRIAL 56 579 - -
Aip03g01674 579 Gene3D - 432 579 - -
Aip03g01674 579 Gene3D - 49 431 - -
Aip03g01674 579 Pfam Pyridine nucleotide-disulphide oxidoreductase 59 382 IPR023753 GO:0016491
Aip03g01674 579 SUPERFAMILY EF-hand 375 465 IPR011992 -
Aip03g01674 579 PRINTS FAD-dependent pyridine nucleotide reductase signature 61 80 - -
Aip03g01674 579 PRINTS FAD-dependent pyridine nucleotide reductase signature 163 181 - -
Aip03g01674 579 PRINTS FAD-dependent pyridine nucleotide reductase signature 224 242 - -
Aip03g01674 579 ProSiteProfiles EF-hand calcium-binding domain profile. 380 415 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01674 Aip-Chr3 20069311 20073999 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01674 1 579 Chloroplast and Mitochondria Gene Families AT4G21490 63.185 0.0 763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01674 K03885 - gmx:100793566 973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01674 03 20069311 20073999 Aip03g01674 03 20069311 20073999 ECH