Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01673 ATGCGTTGGTCATCCTTCTATCACACAGCATCAAGGGTTTTTAATGAGTATCCCAGTTGGTCCAAGTCTGCTATTGTATGCACTGTTATCAGTAGTGGAGGCCTAGTGGCATACGGTGAAGCGGTACAAAGTGAGAATGTGAAAGAAGCCCCAAGAAAGAAAGTGGTGATTCTTGGAACTGGTTGGGCAGGAACCAGTTTTCTTAAGAGCATCAGAAGTTCATCTTATGATATCCATGTTGTTTCACCTCGTAACTATTTTGCATTCACCCCTTTGTTGCCAAGTGTCACTTGTGGCACTGTCGAAGCACGCAGCATTGTTGAACCCATTCGCAACATCTCAAGAAAGAGTGGTGTAAATATTGAATTCAGTGAAGCTGAATGCTATAAGATCGACCCGAAGAACAAGAAAGTTTACTGCCGTGCTGATCCAGAGAAAAAGATGGGTGGGATTGAAGATTTTTCCCTTGATTATGATTACCTTGTAATAGCCATGGGAGCACGTTCTAATACCTTCAACACACCTGGAGTTCAGGAACATGCTTACTTCTTGAAGGAAGTGGATGATGCTCTAAGAATCCGGCAAAAGGTGGTTGATCTTTTTGAGAAAGCAAGCATTCCATCCATATCTGATGAAGAGAAGAAGAAGCTTCTGAGTTTTGTGATTGTTGGAGGAGGCCCAACTGGGGTAGAGTTTGCTGCAGAACTTCATGACTTTGTTCATGAGGATCTTTCTAAACTCTATCCTTCTCTACAACGTTATGTCAATATCACTTTGCTGGAGGCCGGAGATCATATCTTAAACATGTTTGACAAGAGAATCACAGAATTTGCTGAAACAAAGTTCAAAAGGGATGGCATAGATGTGAAGTTAGGATCTATGGTTATCAAAGTAAGTGAGAGAGAAATCTCGGCCAAAGACAGAGTAAGCGGTCAAGTTGCTTCCATACCTCATGGAATGGTAGTTTGGTCCACCGGCGTCGGTCCTCGCCCAGAAATAATTGAATTTATGAAACAAGTTGGCCAGAGTAATAGACGTGCATTAGCCACTGATGAATGGCTAAGGGTGGAGGGATATGACAACATCTATGCTTTAGGTGATTGTGCCACTATAAATCAGAGGAAAGTTATGGAAGATATAGCATTGATATTCAGCAAGGCAGACAAGAAGAACAGCGGGAAGTTGGATCTGAAAGAGTTTCAAGGCGTAGTGGACGACATAATCGAGAGGTACCCTCAGGTGGAGATTTATTTAAAGAAGAACCAAATGAAAGATATTGCCACCTTGCTCAAGTTTTCTCAAGACAGCTCAGTTACTGTTGACATTGAATCCTTCAAATCTGCACTTTCCAATGTTGATACTCAGATGAAAAATCTCCCTCCAACAGCTCAGGTAGCTGCTCAGCAAGGAGCGTATCTTGCAGATTGTTTCAACCGTATGGAGATATGCGAGCGGTATCCGGAAGGTCCTCTTAGATTCAGGGGAACCGGACGCCATCGCTTTCATCCCTTCAGGTACAAGCATTTTGGACAATTTGCTCCTCTAGGAGGAGAACAAACTGCAGCTCAACTTCCGGGAGATTGGATTTCAATTGGCCATAGCACTCAATGGTTGTGGTATTCTATATATGCTAGCAAACTAGTGAGTTGGAGAACAAGAGCATTGGTGGTATCTGATTGGGGAAGGAGATTCGTATTTGGGAGGGACTCAAGTCGAATCTGA 1722 0.4303 MRWSSFYHTASRVFNEYPSWSKSAIVCTVISSGGLVAYGEAVQSENVKEAPRKKVVILGTGWAGTSFLKSIRSSSYDIHVVSPRNYFAFTPLLPSVTCGTVEARSIVEPIRNISRKSGVNIEFSEAECYKIDPKNKKVYCRADPEKKMGGIEDFSLDYDYLVIAMGARSNTFNTPGVQEHAYFLKEVDDALRIRQKVVDLFEKASIPSISDEEKKKLLSFVIVGGGPTGVEFAAELHDFVHEDLSKLYPSLQRYVNITLLEAGDHILNMFDKRITEFAETKFKRDGIDVKLGSMVIKVSEREISAKDRVSGQVASIPHGMVVWSTGVGPRPEIIEFMKQVGQSNRRALATDEWLRVEGYDNIYALGDCATINQRKVMEDIALIFSKADKKNSGKLDLKEFQGVVDDIIERYPQVEIYLKKNQMKDIATLLKFSQDSSVTVDIESFKSALSNVDTQMKNLPPTAQVAAQQGAYLADCFNRMEICERYPEGPLRFRGTGRHRFHPFRYKHFGQFAPLGGEQTAAQLPGDWISIGHSTQWLWYSIYASKLVSWRTRALVVSDWGRRFVFGRDSSRI 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01673 573 ProSiteProfiles EF-hand calcium-binding domain profile. 375 410 IPR002048 GO:0005509
Aip03g01673 573 SUPERFAMILY FAD/NAD(P)-binding domain 220 372 IPR036188 -
Aip03g01673 573 Gene3D - 42 409 - -
Aip03g01673 573 Gene3D - 418 572 - -
Aip03g01673 573 Pfam Pyridine nucleotide-disulphide oxidoreductase 53 376 IPR023753 GO:0016491
Aip03g01673 573 PRINTS FAD-dependent pyridine nucleotide reductase signature 219 237 - -
Aip03g01673 573 PRINTS FAD-dependent pyridine nucleotide reductase signature 55 74 - -
Aip03g01673 573 PRINTS FAD-dependent pyridine nucleotide reductase signature 158 176 - -
Aip03g01673 573 PANTHER - 4 573 - -
Aip03g01673 573 SUPERFAMILY FAD/NAD(P)-binding domain 53 271 IPR036188 -
Aip03g01673 573 PANTHER NADH DEHYDROGENASE 4 573 IPR045024 GO:0003954|GO:0006116
Aip03g01673 573 SUPERFAMILY EF-hand 333 460 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01673 Aip-Chr3 20061036 20066374 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01673 1 573 Chloroplast and Mitochondria Gene Families AT4G21490 68.213 0.0 800
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01673 K03885 - gmx:100820044 964.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01673 03 20061036 20066374 Aip03g01673 03 20061036 20066374 ECH