Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip03g01654 | ATGGGAAATGTTGTGATTTGGTTTCAGATACATGAAGAGGCTAGGAAGTTTGCATATCAAACAGGGGTTAAGGTGGTTGTTGCTTATGGCGGAGCTCCAATAAACCATCAGCTACGAGATCTTGAGAAGGGGGTGGACATTCTCGTCGCAACTCCTGGAAGACTGGTAGATTTGCTGGAGAGAGCTAGAGTTTCACTTCAGATGATCAGATATCTTGCACTAGATGAGGCAGATAGGATGCTAGATATGGGTTTTGAGCCACAAATAAGGAAGATTGTTGAACAAATGGATATGCCCCTCCAGGTGTAA | 309 | 0.4401 | MGNVVIWFQIHEEARKFAYQTGVKVVVAYGGAPINHQLRDLEKGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPLQV | 102 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip03g01654 | 102 | Gene3D | - | 6 | 101 | IPR027417 | - | |
Aip03g01654 | 102 | Pfam | DEAD/DEAH box helicase | 8 | 97 | IPR011545 | GO:0003676|GO:0005524 | |
Aip03g01654 | 102 | PANTHER | ATP-DEPENDENT RNA HELICASE DBP3 | 8 | 100 | - | - | |
Aip03g01654 | 102 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 1 | 102 | IPR014001 | - | |
Aip03g01654 | 102 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 7 | 98 | IPR027417 | - | |
Aip03g01654 | 102 | PANTHER | DEAD-BOX ATP-DEPENDENT RNA HELICASE 52C | 8 | 100 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip03g01654 | Aip-Chr3 | 19697903 | 19698654 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip03g01654 | 9 | 102 | Eukaryotic Initiation Factors Gene Family | AT1G72730 | 38.298 | 5.93e-14 | 64.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip03g01654 | K11594 | - | aip:107607056 | 193.356 |