Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01645 ATGGTCGATCCGGTGACTTACGTGGATGGTTTAAAAAAAAGGTTCAGGGACAGAAAAAAGCCTCTAGGTACTCAGGCTAATCTCGCCGGACAAAGATCTAGTGGGGATCGGGAACACTTTGTCATGCCTGGTGGCAATCTCCACGGCAAAAAAGAACAAGTTGAAGCAGCTTCTGGAAATGGTGTCGTTAACAGAGTGGAGATATGCGAGGACAGCACGTGCGTGGCGGCGATACTGAGCAAGGCGATGAAGGTCTCGAGCGCAGCGGCGGGGCACGCCGTGACGACTCTGTGGAGCGTATGCAATCTGTTTCGTGACCAGAAGGTGCAAGAAGCAGTTATAAAGGCTAACTCTGTTACTGATGCAGAGCAATTGTTCGCCTCCTATGCGCCACTGTAG 399 0.5138 MVDPVTYVDGLKKRFRDRKKPLGTQANLAGQRSSGDREHFVMPGGNLHGKKEQVEAASGNGVVNRVEICEDSTCVAAILSKAMKVSSAAAGHAVTTLWSVCNLFRDQKVQEAVIKANSVTDAEQLFASYAPL 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01645 132 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 64 122 - -
Aip03g01645 132 PANTHER WDSAM1 PROTEIN 64 122 IPR045185 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01645 Aip-Chr3 19427794 19428343 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01645 65 132 U-box Gene Family AT5G09800 52.941 6.72e-16 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01645 - - gmx:100781196 85.8853