Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01643 ATGAAGAGCCCATGGCTCAGGCTTTCTCTTTTAACCACCATAACCATATGCTTCTTTTTTCACCCTCACAATTCCCATGCAGCTTTAACCTCAATCACTTCAAACCAATCTCTCTCCGGTGACCAAACTCTTGTCTCCAAAGATGAAAACTTTGAACTGGGTTTCTTCAAACCAGGTAACGCCTCTATCTACTACATAGGCATGTGGTACAAAAAAAGAGTCTCACAAAGAACCTATGTTTGGGTAGCAAATAGAGATAACCCAGTTTCTGATAAAAATTCTGCCAAATTAACAATATCTAAGGGGAATTTAGTACTCTTAGATGAATCCCAAAAACAAGTTTGGTCAACAAATTTAAGTCCTTCCAACTCAGATTCTAGAGCTGCTGTGCTCTTAGATTCTGGGAATCTTATATTGAGTGATAAGCCTAATCCTTCAGAATCAGAATCTCTATGGCAAAGTTTTGATCATCCCACAGATACATGGCTTCCTGGTGGCAAAATTAAGCTTGATAAAAAAACTGGTAAACCTCAGTACCTAACTTCTTGGAAGAACACTCAAGATCCTGGAACAGGATTGTTCTCTTTGGAACTAGACCCTAAAGGAAGCAAAGCTTACTTGATCCTTTGGAACAAAACTGAAGAATATTGGACTAGTGGAGCTTGGAATGGTCAAATTTTCAGCGGGGTGCCCGAAATGAGGTTGAATTACATCTACAATTTCTCCTTCCATGATGAAGCTGATGAGGCTTACTTCACTTACACGGTGTATAACTCTTCGATTCTTTCGCGGTTCGTGATGGATGTCTCCGGGCAGATCAAGCAGCTTTCATGGCTGGACAATACACAGAATTGGAACTTGTTTTGGTCTCAACCAAGGCAGCAGTGTGAGGTTTACACCTTCTGCGGCGCGTTTGGGAGCTGTACTGAGAATTCTATGCCTTACTGTACTTGTTTGACAGGCTATGACCCAAGTAATTCATCTAACTGGAACTTAGAGGATTACTCAAGTGGATGCAAGAGAAGAACAAAGTTCCAATGCGAGACGGCGAATCCTAACAGTGGTGCAAAGGACAGGTTTATGGCGTTTCCAAACATGGCAGTGCCTAATAATTCTGTAGCTTTGAGTGCAGGGAATGCAGAGGAATGTGCTTCATCCTGCTTGAACCAATGTTCTTGCACTGCTTACGCCTTTAACAGTAAAGGTTGTTCGGTTTGGAAGGGTGATCTCTTGAATCTTCAGCAGCTTACTCAAGGAGATAGCAGTGGACAAACCTTGTTTTTAAGGCTTGCTGCTTCTGAATTTCATGATAGTAAGAGCAACAAGGGGACAATAATCGGCGCAGTCGCAGGTGGCGTTGGCGCCATAGTGGTAGTCCTTGCAGCCCTTATCTGTTTCTTGGTGAGGAGAAGGAGGCGAATTCAAACCGGGACAACCATGGAGGGTTCTTTGGTGGCTTTTGCATACAGAGATTTGCAAAATGCGACAAAGAACTTCTCTGAGAAACTTGGAGGAGGAGGATTTGGTTCTGTTTTCAAAGGAACACTGTCTGATTCCAGTGTCATAGCAGTGAAGAAGCTTGAGAGCATCAGCCAAGGCGAGAAGCAGTTCCGGACGGAAGTTAGCACAATTGGGACAGTCCAGCATGTGAATCTTGTTAGGCTCCGCGGCTTCTGCTCCCAAGGCACAAGGAAGCTTCTAGTCTACGATTTCATGCCTAATGGCTCTTTAGATTCAAGTTTGTTTCATGAGAAGGACTCCAAGGGGTTGGATTGGAAAACAAGGTACCAAATCGCACTTGGGACAGCCAGGGGACTAACTTATCTCCACGAGAAGTGCAGAGATTGCATCATACACTGCGATGTGAAGCCGGAAAACATACTCTTAGACGCCGAATTTTGTCCGAAAGTGGCAGATTTCGGCCTAGCAAAGCTTGTGGGAAGGGACTTCAGCAGAGTCCTTACAACAATGAGAGGAACAAGGGGATACCTTGCGCCGGAGTGGATTTCCGGAGTGCCTATAACAGCGAAAGCAGATGTATACAGCTATGGAATGATGCTATTTGAATTGGTGTCAGGTAGGAGGAACTCCGAGCCGTCAGAAGATGGACAAGTCCGATTCTTCCCTACAACTGCGGCCTACACGGTGAACCAAGGTGGCAATGTTCTTGACCTATTGGACCCAAAGTTGGAGGGAAATGCTGAGATTGATGAGGTGGTTAGAGTGATCAAAGTTGCTTCCTGGTGCGTACAAGATGATGAGGCTCAAAGGCCTTCCATGGGTCAAGTTGTTCAAATTCTTGAAGGGCTTTTGGATGCTTCTTTTCCTCCAGTTCCAAGGTCACTACAGGCATTTGTTGAGAACCAAGAACACATTGTTTTCTTCACTGATTCAAGCTCTACACAGAGTTCACAAGCCAAAAGCAATGTCTCCACAACTTCTTCTCAAGCCAAAAGCAATGTGTCTTCTACAAGCCAGCAACAGCAAGATTAG 2493 0.444 MKSPWLRLSLLTTITICFFFHPHNSHAALTSITSNQSLSGDQTLVSKDENFELGFFKPGNASIYYIGMWYKKRVSQRTYVWVANRDNPVSDKNSAKLTISKGNLVLLDESQKQVWSTNLSPSNSDSRAAVLLDSGNLILSDKPNPSESESLWQSFDHPTDTWLPGGKIKLDKKTGKPQYLTSWKNTQDPGTGLFSLELDPKGSKAYLILWNKTEEYWTSGAWNGQIFSGVPEMRLNYIYNFSFHDEADEAYFTYTVYNSSILSRFVMDVSGQIKQLSWLDNTQNWNLFWSQPRQQCEVYTFCGAFGSCTENSMPYCTCLTGYDPSNSSNWNLEDYSSGCKRRTKFQCETANPNSGAKDRFMAFPNMAVPNNSVALSAGNAEECASSCLNQCSCTAYAFNSKGCSVWKGDLLNLQQLTQGDSSGQTLFLRLAASEFHDSKSNKGTIIGAVAGGVGAIVVVLAALICFLVRRRRRIQTGTTMEGSLVAFAYRDLQNATKNFSEKLGGGGFGSVFKGTLSDSSVIAVKKLESISQGEKQFRTEVSTIGTVQHVNLVRLRGFCSQGTRKLLVYDFMPNGSLDSSLFHEKDSKGLDWKTRYQIALGTARGLTYLHEKCRDCIIHCDVKPENILLDAEFCPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVPITAKADVYSYGMMLFELVSGRRNSEPSEDGQVRFFPTTAAYTVNQGGNVLDLLDPKLEGNAEIDEVVRVIKVASWCVQDDEAQRPSMGQVVQILEGLLDASFPPVPRSLQAFVENQEHIVFFTDSSSTQSSQAKSNVSTTSSQAKSNVSSTSQQQQD 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01643 830 SMART serkin_6 497 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g01643 830 Pfam S-locus glycoprotein domain 217 325 IPR000858 GO:0048544
Aip03g01643 830 CDD B_lectin 35 158 IPR001480 -
Aip03g01643 830 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Aip03g01643 830 ProSiteProfiles Protein kinase domain profile. 497 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g01643 830 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 223 IPR036426 -
Aip03g01643 830 ProSiteProfiles Bulb-type lectin domain profile. 29 152 IPR001480 -
Aip03g01643 830 PIRSF SRK 1 820 IPR024171 GO:0004674
Aip03g01643 830 Gene3D - 24 155 IPR036426 -
Aip03g01643 830 SMART blect_4 35 158 IPR001480 -
Aip03g01643 830 Pfam Protein kinase domain 500 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g01643 830 SUPERFAMILY Hairpin loop containing domain-like 357 415 - -
Aip03g01643 830 CDD PAN_AP_plant 355 431 - -
Aip03g01643 830 Gene3D Phosphorylase Kinase; domain 1 464 571 - -
Aip03g01643 830 Pfam D-mannose binding lectin 78 184 IPR001480 -
Aip03g01643 830 SUPERFAMILY Protein kinase-like (PK-like) 484 801 IPR011009 -
Aip03g01643 830 Pfam PAN-like domain 355 412 IPR003609 -
Aip03g01643 830 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 11 797 - -
Aip03g01643 830 ProSitePatterns Protein kinases ATP-binding region signature. 503 526 IPR017441 GO:0005524
Aip03g01643 830 Gene3D Transferase(Phosphotransferase) domain 1 572 775 - -
Aip03g01643 830 ProSiteProfiles PAN/Apple domain profile. 347 431 IPR003609 -
Aip03g01643 830 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 11 797 - -
Aip03g01643 830 CDD STKc_IRAK 503 770 - -
Aip03g01643 830 MobiDBLite consensus disorder prediction 797 830 - -
Aip03g01643 830 SMART ntp_6 355 430 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01643 Aip-Chr3 19321442 19324278 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01643 439 769 Receptor kinase-like Gene Family AT1G56120 44.838 4.14e-77 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Aip03g01643 Pkinase 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01643 - - adu:107477835 1549.26