Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01630 ATGGTAGACACCAAGAGATTCTGTTCTAACCGCATGCTGTTTTTCTTCCTTTTGTGTTCATTCTTTTGCACTTGCATGCATTGTTATGGTAGAGATACCATAACCATTAACAATTTCTTACTAGATGGAGGAGGAGGAAGAGGAGATGCTCTAATTTCTGATGGAGAAAACTTTGAGCTGGGATTTTTCACCCCTAATGGAAGCTCTAGCGGAAGAAGAAGATATATTGGAATGTGGTACTACAATTTGAGTCCAAGAACAGTTGTGTGGGTGGCTAATAGGGACACCCCTCTTGAAGATTTCGGGGGCGCTTTCGGCATTTCAGAAGACGGTAATCTGAGGGTTCTGGACAGAAATGGGAGACCCTTTTGGGGGACAAGTCTTGAAACATCATCAAATTCATCACTTCACAGAACACTGAAGCTAATGGACAATGGTAACCTCATTGTAATTGATGAACAAGACGAAGAAGAAACCAAGAAAACAAAGATCCTTTGGGAGAGTTTTGCTAATCCAACAGATACATTCCTTCCAGGGATGAAAATGTATCAGGGTTTATCATTAACTTCTTGGCGAAGCAACGTCGACCCTTCGCCGGGGAACTACTCTTTCCAGCGAGATCAAGAAGATAGCAACAACAACAACGACCAATACATGATATGGAAGAGATCCGTAAGGTATTGGAAAAGCAGTGTGACAGGTAAGGTAGTGGGAACAGGTGAAATGTCTTTAGCAATATCATATTTTCTTTCAAATTTCACTGAGAAGATTTCCCAAAACTACAACAACACTGTCCCTTTTCTCACTTCTTCACTTTATAGCAACACAAGGTTGGTTATCACTTACTGGGGTCAGCTTCTGTATCTAAAGATGGATTCAGAGAAAACTTGGTCTAATGTTTGGGTTGAGCCTAGAGATAGATGCAGTGTGTTCAATGCCTGCGGAAATTTTGGAAGCTGTAATAGCAAGTATCATGCTATGTGTAAGTGCTTGCCAGGGTTCAGGCCTAACTCTCTTGAGACTTGGGATGCCGGTGATTTTTCCCGTGGATGCAGCCGGAAAACTAACGTGTGCAGCGAGGATGCCAAGAGTGACACTTTCTTGAGGCTGAAAATGATGAAAGTTGGGAATCCAGATGCTCAGTTTAAGGCCAAGAGTGAAGAGGAATGCAAGGCAGAGTGCCTCAACAACTGCCAATGCTATGCGTATTCGTATGAAGACGATCAGACCAGAGGCAGCGAGGGCGGTAGCGGCCGCAGCAGTAGTGATGCGGTTTGCTGGATTTGGTCTGAGGACCTTAACAATCTTGAAGAAGATTATGAGAATGGCTGCGACCTCAATGTCCGTGTTGCGCTTTCTGATATAGCAGAATCCACAGGGAAGAGTTGTGGAACTTGTGGCACAAACTTGATTGCATATCCCCTGAGCAGAGGAGCAAATTGTGGTGACCCAATGTACTTGAGTTTCCATTGCAATGACTCCACAGGCCAGCTTGATTTCGAGACGCCAGGGGGTGCTTTTCGCGTGATAAGCATAGATCAGGACAAGCGAAAATTTGTTATTCACATTGAAGATGTAGAAAATTGTGAAGGTCAAACATCAAGGGACAACAAGAAGCTTCTGCTTCTCAATGATTCATCTCCATTTCATCTTACTGGCACTTGCTATGCTGATCCAAGAACCTTTACTTCTGCTGCTCCAATGAAACATGGAGTAGAGTTGGAACTGAGTTGGGATCCGCCGTCCGAGCCACTTTGCTCCACCTTGCTGGATTGCATGGATTGGCCAAATTCAAGTTGCAATACCACAAGTGATGGCAACAAGAGGTGCCTTTGCAACACTAACTATTTTTGGGATGGCATGAAATTGAACTGTACTAATGGCAATCAAAGCTACCAAGCAGACAGGAATCTATCCTTAACTCAGATCATGGAAATCACTTTTACAATTGTGATTGCCATCATTCTTCTCTCAAGTACTGTTATATACATCTACTTGAAGAAAAGGAGACATGCTAATTCACAAGAAATCAGGGGATATACAAAGAAGAATCCAGCAGGCCTTAGCAGTGAGAAATATGTAAGAGACTTGATTGAATCTGGTAGGTTCAAAGAAGAGAATTCACAGGCCATAGATATTCCACATTTTCATCTAGAAAGTGTTCTTGATGCTACTAATAACTTTGCAATTGCAAACAAGCTTGGACAAGGGGGGTTTGGTCCTGTTTATAAGGGAAAGTTTCCTGGTGGACAAGAAATAGCCGTAAAGAGACTTTCGAGTTGTTCCGGACAAGGCTTAGAAGAGTTCAAAAATGAAGTTGTGTTGATTGCCAAACTTCAACATCGGAACCTTGTTAGGCTACTTGGTTATTGTCTTGAGGGAGATGAAAAGATGTTAATATATGAATACATGCCTAATAGAAGCTTAGATGGTTTCATATTTGACCGGAAGCTATGTGTTCTATTAGACTGGGATGTGCGCTTCAAGATTATTTTGGGGATTGCCCGAGGACTCCTTTATCTTCACGAAGATTCAAGATTACGGATCATTCACAGAGACTTGAAAACAAGCAATATTCTATTGGATGAAGAGAAGAATCCGAAAATTTCAGATTTCGGCTTGGCTAGAATATTTGGAGGGAAAGACACAGTAGCAAACACAGACAGAGTAGTTGGAACTTATGGATATATGTCACCAGAATATGCACTTGACGGACATTTTTCCGTCAAGTCCGATGTCTTTAGCTTCGGGGTGGTAGTTCTTGAGATCATCAGTGGGAAAAGAAACACTGGATTTTATCAAGCAGAACAAGAATTGAGTCTTCTAGGATTTGCATGGCATTTATGGAAAGTGGGAAGGGCATTGGACTTCATGGACCAGACACTATGTGAAACATGCAATGCTGATGAGTGCTTGAAGTGTGTGAATGTTGGGCTGCTATGCCTACAAGAAGATCCAAATGAAAGACCAAACATGTCAAATGTGGTCTTCATGCTTGGCAGTGAATCCAACACTCTTCCAAGTCCTAAGGAACCAGCATTTGTAATGAGGAGATGCCCTTCTAGCAGAGCCTCTACTTCTAGTAAATTGGAAACTTTCTCAAGGAATGATTTGACTGTTACCTTAGAAAATGGAAGGTAG 3141 0.4218 MVDTKRFCSNRMLFFFLLCSFFCTCMHCYGRDTITINNFLLDGGGGRGDALISDGENFELGFFTPNGSSSGRRRYIGMWYYNLSPRTVVWVANRDTPLEDFGGAFGISEDGNLRVLDRNGRPFWGTSLETSSNSSLHRTLKLMDNGNLIVIDEQDEEETKKTKILWESFANPTDTFLPGMKMYQGLSLTSWRSNVDPSPGNYSFQRDQEDSNNNNDQYMIWKRSVRYWKSSVTGKVVGTGEMSLAISYFLSNFTEKISQNYNNTVPFLTSSLYSNTRLVITYWGQLLYLKMDSEKTWSNVWVEPRDRCSVFNACGNFGSCNSKYHAMCKCLPGFRPNSLETWDAGDFSRGCSRKTNVCSEDAKSDTFLRLKMMKVGNPDAQFKAKSEEECKAECLNNCQCYAYSYEDDQTRGSEGGSGRSSSDAVCWIWSEDLNNLEEDYENGCDLNVRVALSDIAESTGKSCGTCGTNLIAYPLSRGANCGDPMYLSFHCNDSTGQLDFETPGGAFRVISIDQDKRKFVIHIEDVENCEGQTSRDNKKLLLLNDSSPFHLTGTCYADPRTFTSAAPMKHGVELELSWDPPSEPLCSTLLDCMDWPNSSCNTTSDGNKRCLCNTNYFWDGMKLNCTNGNQSYQADRNLSLTQIMEITFTIVIAIILLSSTVIYIYLKKRRHANSQEIRGYTKKNPAGLSSEKYVRDLIESGRFKEENSQAIDIPHFHLESVLDATNNFAIANKLGQGGFGPVYKGKFPGGQEIAVKRLSSCSGQGLEEFKNEVVLIAKLQHRNLVRLLGYCLEGDEKMLIYEYMPNRSLDGFIFDRKLCVLLDWDVRFKIILGIARGLLYLHEDSRLRIIHRDLKTSNILLDEEKNPKISDFGLARIFGGKDTVANTDRVVGTYGYMSPEYALDGHFSVKSDVFSFGVVVLEIISGKRNTGFYQAEQELSLLGFAWHLWKVGRALDFMDQTLCETCNADECLKCVNVGLLCLQEDPNERPNMSNVVFMLGSESNTLPSPKEPAFVMRRCPSSRASTSSKLETFSRNDLTVTLENGR 1046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01630 1046 SMART blect_4 37 172 IPR001480 -
Aip03g01630 1046 Pfam Protein tyrosine and serine/threonine kinase 730 997 IPR001245 GO:0004672|GO:0006468
Aip03g01630 1046 SMART ntp_6 362 450 IPR003609 -
Aip03g01630 1046 Pfam S-locus glycoprotein domain 238 337 IPR000858 GO:0048544
Aip03g01630 1046 CDD STKc_IRAK 734 999 - -
Aip03g01630 1046 CDD B_lectin 51 172 IPR001480 -
Aip03g01630 1046 Pfam D-mannose binding lectin 87 183 IPR001480 -
Aip03g01630 1046 ProSiteProfiles PAN/Apple domain profile. 358 444 IPR003609 -
Aip03g01630 1046 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 27 1042 - -
Aip03g01630 1046 ProSitePatterns Serine/Threonine protein kinases active-site signature. 849 861 IPR008271 GO:0004672|GO:0006468
Aip03g01630 1046 Gene3D Transferase(Phosphotransferase) domain 1 804 1010 - -
Aip03g01630 1046 Gene3D Phosphorylase Kinase; domain 1 691 803 - -
Aip03g01630 1046 Pfam PAN-like domain 361 435 IPR003609 -
Aip03g01630 1046 SMART serkin_6 728 998 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g01630 1046 ProSiteProfiles EGF-like domain profile. 304 340 IPR000742 -
Aip03g01630 1046 Gene3D - 31 170 IPR036426 -
Aip03g01630 1046 SUPERFAMILY Protein kinase-like (PK-like) 709 999 IPR011009 -
Aip03g01630 1046 SUPERFAMILY alpha-D-mannose-specific plant lectins 88 197 IPR036426 -
Aip03g01630 1046 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 27 1042 - -
Aip03g01630 1046 CDD PAN_AP_plant 358 451 - -
Aip03g01630 1046 ProSiteProfiles Bulb-type lectin domain profile. 36 163 IPR001480 -
Aip03g01630 1046 ProSiteProfiles Protein kinase domain profile. 728 1014 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01630 Aip-Chr3 19111984 19116567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01630 724 1014 Receptor kinase-like Gene Family AT4G23230 61.168 9.86e-121 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip03g01630 PK_Tyr_Ser-Thr 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01630 - - gmx:100775297 1598.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01630 03 19111984 19116567 Aip03g01630 03 19111984 19116567 ECH
Aip08g00818 08 8480950 8484986 Aip03g01630 03 19111984 19116567 PCT
Aip03g01630 03 19111984 19116567 Aip08g00817 08 8475921 8479619 PCT