Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01617 ATGAGGAGCGCAAGAAGCTCAAGGCCGAAGCTGCGCAGATCAGGGCTCCGGAGCACAAGATCGCGCAACAAGAATTCAGAGAAACACTCGAGGGTCCGCATAACCTGCAACGGGGTTGAGGTTGGCCGCCTAAATACAGGTGGAGGAGCAGAGGTTGGGTCTTTGAGATGTTGGCCTGGTGGCTTGTGTCTTTCGAGATCCATTGGTGATGCGGATCTTTCTAGTGCCGGAGGAAGGCTTGTTATCAGCAGTGATGGTGTCTGGGACTCTCTAACTCCAGAAGTGGCCTTGGATTGTTGTCGTGGCATGTCAGCAGAGGCTGCAGCACCACAAATTGTGAATGTATGCCTATCTAAGGATGCAATCAAGCAGTTGCAATCCATGATGGAAAATGTGAATGAGCAGCAGAAGATCACATTCCAGAACATGCATCAGGGATATCCAAAGGACTGGAATGTTGCCAAAGCCCATAAAATGATAATCGATTGTTTACAATGGAGAGTTGAAAATGAGATTGACAATGTTTTATTATCATAG 537 0.4767 MRSARSSRPKLRRSGLRSTRSRNKNSEKHSRVRITCNGVEVGRLNTGGGAEVGSLRCWPGGLCLSRSIGDADLSSAGGRLVISSDGVWDSLTPEVALDCCRGMSAEAAAPQIVNVCLSKDAIKQLQSMMENVNEQQKITFQNMHQGYPKDWNVAKAHKMIIDCLQWRVENEIDNVLLS 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01617 178 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 25 119 - -
Aip03g01617 178 MobiDBLite consensus disorder prediction 1 19 - -
Aip03g01617 178 SUPERFAMILY CRAL/TRIO N-terminal domain 148 176 IPR036273 -
Aip03g01617 178 MobiDBLite consensus disorder prediction 1 30 - -
Aip03g01617 178 Gene3D - 11 132 IPR036457 -
Aip03g01617 178 PANTHER ALPHABET, ISOFORM E-RELATED 25 119 - -
Aip03g01617 178 SUPERFAMILY PP2C-like 22 119 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01617 Aip-Chr3 18812793 18816340 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01617 28 123 PP2C-type Phosphatase Gene Family AT1G47380 56.757 1.64e-35 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01617 - - mnt:21386903 139.043