Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01613 ATGTTTCCAATGAATTTCAGTCATTTGTTTAACAGTGAGGGTGAAGACTCGGTTGGGAGTGCCTCCGATGATAGTTGCAGACATTATTGTGCGAGTGGTGATACATACGACGACGACGAAAACCTCGAATGCAGTGCGGGCGGCACTAGCGGGGAAAATAGTGAAGGTGGTGCCGATGATGGTAATGGGTCGGGTGATGCAGATGATGTGGCAGAGGGTTGTCTCCGCCGGCCAGTCGATGCGAAGGACTTCTTGGGAAAAGAGTTTGCAACTGAGGAGGATGCTTACGCTGCCTACAAGGAATTCGCTAAATTAAGGGGTTTCGGAGTTCGGAAGGGAGATGTAGCTCGTGTAAATGGGGTGTTGCTTAGGAGAGACTTTTTCTATCATCGACAAGGTACAAGACATCCTAAGCACTACGACCGTCTTGAGCGAGTAAGGGAGGAGAGGTTGGAGAGTCGGACGGACTGTAAGGCAAAGTTGAAGATTTACTATGATATACAGCATAGCGTGTGGAGGGTCAGAACCATCGTGGACGAACACAACCATGAGCTTGCCCCAGCAGTGTTTGCACGTCTCCTTCCTAGTCATCGGAGGATGAGTGAGGGTGGCAAGGCACATGTGGATAGTTTGAAGTAG 639 0.4977 MFPMNFSHLFNSEGEDSVGSASDDSCRHYCASGDTYDDDENLECSAGGTSGENSEGGADDGNGSGDADDVAEGCLRRPVDAKDFLGKEFATEEDAYAAYKEFAKLRGFGVRKGDVARVNGVLLRRDFFYHRQGTRHPKHYDRLERVREERLESRTDCKAKLKIYYDIQHSVWRVRTIVDEHNHELAPAVFARLLPSHRRMSEGGKAHVDSLK 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01613 212 Pfam FAR1 DNA-binding domain 99 187 IPR004330 -
Aip03g01613 212 MobiDBLite consensus disorder prediction 34 71 - -
Aip03g01613 212 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 76 185 IPR031052 GO:0006355
Aip03g01613 212 PANTHER PROTEIN FAR1-RELATED SEQUENCE 11 76 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01613 Aip-Chr3 18779670 18780308 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip03g01613 FAR1 9.8e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01613 - - aip:107607194 317.775