Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01603 ATGCTAGATTGGCTTAAGCGTTTCAACATTATCATTGGTATTGCTCGGGGACTTCTTTATCTTCATCAGGATTCTAGACGGAGGATTATTCATAAAGACTTGAAAACTAGCAACATTCTGTTAGATGCAAATTTGAATCCTAAAATATCAGACTTTGGCCTAGCTCGGACATTCTTAGGCAATCAGCTCGAGGCTAACACGAACAGGGTAGCTGGAACATATACATGGACAATATTCAATGAAGTCTGA 249 0.3896 MLDWLKRFNIIIGIARGLLYLHQDSRRRIIHKDLKTSNILLDANLNPKISDFGLARTFLGNQLEANTNRVAGTYTWTIFNEV 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01603 82 ProSitePatterns Serine/Threonine protein kinases active-site signature. 29 41 IPR008271 GO:0004672|GO:0006468
Aip03g01603 82 Gene3D Transferase(Phosphotransferase) domain 1 1 78 - -
Aip03g01603 82 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1 75 - -
Aip03g01603 82 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 75 - -
Aip03g01603 82 Pfam Protein kinase domain 9 76 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g01603 82 ProSiteProfiles Protein kinase domain profile. 1 82 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g01603 82 SUPERFAMILY Protein kinase-like (PK-like) 2 76 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01603 Aip-Chr3 18686689 18687039 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01603 2 76 Receptor kinase-like Gene Family AT4G11530 68.000 1.49e-32 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip03g01603 Pkinase 9.3e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01603 - - aip:107614885 142.51