Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01601 ATGGTGTGGCACGAAATCAGCGGAGGTTCATTCGTATTCAATGAGGAACAGATGGAGTTTTTATTTGGTTGCACAAACCATAACAAAAATGAACGCAAAAAGGATTCACCACAAATTGATTCAGCACAGCTTGTTCAGATTATTGACAAGAAAAAAGCACAGAATTTGTCAATTCTTTTGAAAGCTTTGAATGTGACAACAGAGGAAGTTGTTGATGCCATTAAAGAAGGTAATGAGCTTCCTATTGAGCTCATGCAGACACTGGTGAAGATGGCTCCGACATCCGACGAAGAATTGAAGCTTAGGTTATATACAGGACCCCTTTCTGATCTTGGCCCTGCAGAGAAGTTTCTCAAAGTCTTGGTAGATATTCCATTTGCTTTCAGACGCATTGAATGTTTGATTTTCATGTGTACCCTTCAAGAAGAGTCCTCAACTATGAGGGAGTATTTCACAACATTAGAGGTTGCTTGCAAGAAACTTGTAAAAAGTAGGCTATTCTTGAAGCTTCTAGAAGCAGTTCTTAAAACCGGCAACCGAATGAACGACGGAACATACCGCGGCGGCGCGCAAGCATTCAAGCTGGACACACTCTTGAAGCTATCAGACGTGAAAGGAACAGATGGGAAGACGACGCTGCTGCACTTCGTTGTTCAAGAAATCATTCGATCCGAGGGAGTTAGAGCTCTAAGAACGGCGAAAGAAAGCGGAAGCATGCCAAACTTGGAAACAGAGGATTCTTCTGAAGAAAACTACCGAAGCCTCGGCATTGAAGTAGTTTCAGGCCTAAGCGCTGAGCTATTGGACGTGAGAATGGCGGCGTTAATAGACGGCGATTTGATCAGTTCTACGGTGGCGAAACTCAGCCACTCGCTTTCCAAGACTCGAGAGTTTCTTGACACCGAGATGAAGAACGTTCAAGAAGACGGCGAGTTCCGATCTTGCATGGAGGGATTTCTGGAGAAGGCGACATCGGAAGTGGCTTGGTTGATTGAGGAGGAGAAGAGGATAACGGAACTTGTTAAGGGAACTGCAGATTATTTTCACGGTAATTCAGGGAAAGAAGAAGGGCTTAGATTGTTCGCCGTTGTCCGCGATTTCTTGTTCATATTGGATAAGGTGTGCAAGGAGGTGAAGGAAACAAACATTAAAGAGGCAAAGATTAATGCTGCTTCAAAGAATTATAATAATAACAATAATAATCATAATGATAATAACAATAATAATAGTAATGTTAAAGAGTCTTCACCGTCAGTGACGCCGTCTTCTACCACGGAAGCTCAACAGCAAAATTCAGGGCCTTCTGAACTTCATAGGAGATTGTTTCCTGCTATTGTCCAGAGGAGAGTGGATGATGATTCTAGCTCTGATGATGACTACGACGATGACGACGATAATAACAAAATTTCTCCATAA 1416 0.4266 MVWHEISGGSFVFNEEQMEFLFGCTNHNKNERKKDSPQIDSAQLVQIIDKKKAQNLSILLKALNVTTEEVVDAIKEGNELPIELMQTLVKMAPTSDEELKLRLYTGPLSDLGPAEKFLKVLVDIPFAFRRIECLIFMCTLQEESSTMREYFTTLEVACKKLVKSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGVRALRTAKESGSMPNLETEDSSEENYRSLGIEVVSGLSAELLDVRMAALIDGDLISSTVAKLSHSLSKTREFLDTEMKNVQEDGEFRSCMEGFLEKATSEVAWLIEEEKRITELVKGTADYFHGNSGKEEGLRLFAVVRDFLFILDKVCKEVKETNIKEAKINAASKNYNNNNNNHNDNNNNNSNVKESSPSVTPSSTTEAQQQNSGPSELHRRLFPAIVQRRVDDDSSSDDDYDDDDDNNKISP 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01601 471 MobiDBLite consensus disorder prediction 393 471 - -
Aip03g01601 471 SUPERFAMILY Formin homology 2 domain (FH2 domain) 43 398 - -
Aip03g01601 471 Pfam Formin Homology 2 Domain 1 369 IPR015425 -
Aip03g01601 471 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 397 IPR015425 -
Aip03g01601 471 PANTHER FORMIN-RELATED 1 460 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Aip03g01601 471 MobiDBLite consensus disorder prediction 393 436 - -
Aip03g01601 471 Gene3D Formin, FH2 domain 1 412 IPR042201 -
Aip03g01601 471 SMART it6_source 1 386 IPR015425 -
Aip03g01601 471 PANTHER FORMIN-LIKE PROTEIN 3 1 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01601 Aip-Chr3 18679167 18682602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01601 1 451 FH2 protein (formin) Gene Family AT5G54650 56.616 2.27e-171 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01601 - - ahf:112737572 842.417