Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01598 ATGGCATTAACAATCGTCGAGTTTATTGGGTACTGTTCAGAGCATGGTCAAAGGCTTCTGATATATGAGTATTGCAGTAATGGATCACTCAATGAGGCACTCCACTCAGAGGATGAATTTAAAACAAGACTCACATGGAATGCTTGCATCCGGATAGCACTTGGGGCGGCTAGGGCCCTAGAGTATTTGCATGAGCAAGAGCAATGTCAGCCGGCTGTGATTCACAGAAATTTCAAGTCTGCTAACATTCTTCTTGACAATGACCTATAa 270 0.4333 MALTIVEFIGYCSEHGQRLLIYEYCSNGSLNEALHSEDEFKTRLTWNACIRIALGAARALEYLHEQEQCQPAVIHRNFKSANILLDNDL 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01598 89 Gene3D Transferase(Phosphotransferase) domain 1 3 89 - -
Aip03g01598 89 SUPERFAMILY Protein kinase-like (PK-like) 5 88 IPR011009 -
Aip03g01598 89 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED 5 89 - -
Aip03g01598 89 ProSiteProfiles Protein kinase domain profile. 1 89 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g01598 89 PANTHER OS01G0253100 PROTEIN 5 89 IPR045271 GO:0004714|GO:0006468
Aip03g01598 89 Pfam Protein tyrosine and serine/threonine kinase 4 87 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01598 Aip-Chr3 18582059 18582913 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01598 5 89 Strubbelig Receptor Gene Family AT4G03390 69.412 2.10e-40 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Aip03g01598 PK_Tyr_Ser-Thr 3.2e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01598 - - ahf:112737625 154.836