Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01597 ATGATTGAACAGAGCGGTTTATTGCTATGTGTTTTCATATGCTTCTTGCTATATCATGCTGTGAGGGCTGAGATACCATTAGGTTCTAGACTTTCGGTGGTTGACAATGGCAGCTGGGTTTCCAAAAATGGTAATTTTACCATTGGATTTCTTAAGATTTCGGATGAGCCTGGCCAGTTTAGTTTTGGCATTCGTTTCAGCGACAAGTCTATACCGTATAGTCAACAAAGAATGGTGTGGAGTGCTGACTTTCTGTATGGAGTAGGTAACATGTCCTATTTCCTTTTCACCACAGATGGTGAAATGGTCCTGTTTGATGATCAGGGAATGCCTTCATGGAGCAGCCAAACCAGTAACAAGGGTGTCGTGTCGGCTTCTCTTCTTGACAATGGAAATCTTGTTCTAATCGACAGAGAGCAAAAGGTCATTTGGCAAAGTTTTGATAGTCCAGATGATACGCTTCTCCCAGGACAGTTTCTATCTTGTGATAAGATGCTTCAAGCTGCAAGTACGAATCTACTGTCCAGTTACTACACCCTGTCTATGAATGTTTCGGGACACTTGATGCTCCTTTGGCAAGGTATTATTCCCTACTGGACAAGCCAAAACCCTTCTGTTCCGAATCTCACTGCATATGTAACAAACAATGGAGCTCTGCAACTTTTAGACAAAAATCTTAATGTTGTTTGGACCGTGTTTGGAGAAGACCACGATGAATATGTTAAATACCGGTTTCTTAGGATAGATGTGGATGGCAATCTCCGCTTATATTCGTGGGTGGAGGCTTTGCAGTCATGGAAATCTGTCTGGCAAGCTGTTCAGAACCAGTGCAAGGTTTTTGCGACTTGCGGTAAACGGGGGGTCTGTGTTTTGTCTTCCTGTGGTACTGCTGATTGTGTGTGCCCTTTCAACCAGACGGACACTGATGAGACTTGTTTCATTCCATATGAACAAAAGTGTAAACATGGTTCCACTATGGTCGCATATAGGCACATACACCTATATGGGCTTTACCCTATTGATGGTCCGGCTATCATGACTAGCGTGAATAAATGTATGCAATTGTGCCAGAATGACTCTAGTTGTACTGCCGCAACCTTTTCTAATCATGTTCTTCCCCAGTGCTCGATAAAGAAATCTGAGTATGTCACTGGCTATTTAGATCCGTCTCCAAACGTGGTATCATTTGTCAAGAGTTGCTCATCTACATCTGCCCTAAAGTTCCCATGTCAAAGCTCACCTGCAACAGAAGAAGATCCTCATACTTGTGTTCCTTGTCTAATAGGAATATCCTTAGCCACAATTATCATCGGTGTTGTCCTTCAACTCGGATGTTATTATTATCTTTTCATCTACAAAAGGAAAACCTCTACTAGATGCAAATACAATTTACCTTCCGCAGACACAAATTTAAAGGGCCTAGTTGTGTTGTTATCTTTTTCAGAGATCAAGAGCGTCACTGAGGATTTCAAAGATCGAATTGGGCCAAATATGTTCAAGGGCATGCTACTAAACAAATTCCCAGTTGCTGTTAAAGAGCTGATTGCATCCATAGATGCAAGGAAGTTCCGGACTGCTGTTCTGAAGATTGGAGGCATCCACCACAAGAACCTTGTGCAGCTGGAGGGCTATTGTTGCGAGTCCAATCATAGATTCTTGGTCTACGAGTACGTCAAAAACGGTTCTCTTGAGAAGTATATAGATGATTCCGCTCTTTGCAAGGAACTGACCTGGAGAAAAAGGGTTGACATATGCTTAAGCGTGGCCCAGGCCCTTAATTATCTTCACTCTGAATGCAGGGAGTTCATAAGTCATGGAAATCTGAAGTGTGAAAATGTCATGTTGGATGAGAACTTAAAAGCCAAGGTGAGCGAATCTGGGTTTGCAATAGTAGACGGCGAGGCAGTGTACTGTGCCTTTTCTGCCAAGAGAGACATAGCAGATTTCGGCATGTTAGTCCTAACCTTATTGACCGGATGTAGAGATCAAAGTGATCTTTGTGAGTGGTCATATAAAGAATTGATAGAAGGGAATGCTGCAAATGTGATTGACAAAAGAATTCAAGGTGGTGCCAATTCAAATGAACTTGAGCGCGTTTTGAGAATCGCATTCTGGTGCCTACAAAGCAATGAACATCAAAGGCCTTCAATGGAGGATGTAGTGGCAGTACTGGACGGAACTTTGAGTATTGATCCACCACCACCTCCATTTTGA 2214 0.4259 MIEQSGLLLCVFICFLLYHAVRAEIPLGSRLSVVDNGSWVSKNGNFTIGFLKISDEPGQFSFGIRFSDKSIPYSQQRMVWSADFLYGVGNMSYFLFTTDGEMVLFDDQGMPSWSSQTSNKGVVSASLLDNGNLVLIDREQKVIWQSFDSPDDTLLPGQFLSCDKMLQAASTNLLSSYYTLSMNVSGHLMLLWQGIIPYWTSQNPSVPNLTAYVTNNGALQLLDKNLNVVWTVFGEDHDEYVKYRFLRIDVDGNLRLYSWVEALQSWKSVWQAVQNQCKVFATCGKRGVCVLSSCGTADCVCPFNQTDTDETCFIPYEQKCKHGSTMVAYRHIHLYGLYPIDGPAIMTSVNKCMQLCQNDSSCTAATFSNHVLPQCSIKKSEYVTGYLDPSPNVVSFVKSCSSTSALKFPCQSSPATEEDPHTCVPCLIGISLATIIIGVVLQLGCYYYLFIYKRKTSTRCKYNLPSADTNLKGLVVLLSFSEIKSVTEDFKDRIGPNMFKGMLLNKFPVAVKELIASIDARKFRTAVLKIGGIHHKNLVQLEGYCCESNHRFLVYEYVKNGSLEKYIDDSALCKELTWRKRVDICLSVAQALNYLHSECREFISHGNLKCENVMLDENLKAKVSESGFAIVDGEAVYCAFSAKRDIADFGMLVLTLLTGCRDQSDLCEWSYKELIEGNAANVIDKRIQGGANSNELERVLRIAFWCLQSNEHQRPSMEDVVAVLDGTLSIDPPPPPF 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01597 737 PIRSF SRK 2 737 IPR024171 GO:0004674
Aip03g01597 737 Pfam Protein tyrosine and serine/threonine kinase 505 629 IPR001245 GO:0004672|GO:0006468
Aip03g01597 737 SMART ntp_6 321 399 IPR003609 -
Aip03g01597 737 Gene3D Hepatocyte Growth Factor 328 403 - -
Aip03g01597 737 SMART blect_4 30 150 IPR001480 -
Aip03g01597 737 SUPERFAMILY alpha-D-mannose-specific plant lectins 168 268 IPR036426 -
Aip03g01597 737 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 201 IPR036426 -
Aip03g01597 737 Gene3D Phosphorylase Kinase; domain 1 453 557 - -
Aip03g01597 737 ProSiteProfiles Bulb-type lectin domain profile. 24 148 IPR001480 -
Aip03g01597 737 Gene3D - 19 149 IPR036426 -
Aip03g01597 737 ProSiteProfiles Protein kinase domain profile. 469 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g01597 737 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD3-1 6 737 - -
Aip03g01597 737 Pfam D-mannose binding lectin 80 167 IPR001480 -
Aip03g01597 737 ProSiteProfiles PAN/Apple domain profile. 320 400 IPR003609 -
Aip03g01597 737 ProSiteProfiles Bulb-type lectin domain profile. 151 269 IPR001480 -
Aip03g01597 737 PANTHER OS07G0415500 PROTEIN 6 737 - -
Aip03g01597 737 SUPERFAMILY Protein kinase-like (PK-like) 499 724 IPR011009 -
Aip03g01597 737 CDD B_lectin 58 150 IPR001480 -
Aip03g01597 737 Pfam S-locus glycoprotein domain 223 304 IPR000858 GO:0048544
Aip03g01597 737 Gene3D - 150 268 IPR036426 -
Aip03g01597 737 Gene3D Transferase(Phosphotransferase) domain 1 558 635 - -
Aip03g01597 737 Gene3D Transferase(Phosphotransferase) domain 1 636 731 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01597 Aip-Chr3 18578732 18581169 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01597 413 736 Receptor kinase-like Gene Family AT1G66910 30.749 1.56e-38 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Aip03g01597 PK_Tyr_Ser-Thr 9.7e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01597 - - ahf:112737567 1395.56