Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01595 ATGGTGATGCTGCAGCTTCACCAACTCTGGGCACGAATTGGGCACCCCGAGGATGAATTTAAAACAAGACTCACATGGAATGCTTGCATCCGGATAGCACTTGGGGCGGCTAGGGCCCTAGAGTATTTGCATGAGCAAGAGCAATGTCAGCCGGCTGTGATTCACAGAAATTTCAAGTCTGCTAACATTCTTGTTGACAATGACCTATAa 210 0.4762 MVMLQLHQLWARIGHPEDEFKTRLTWNACIRIALGAARALEYLHEQEQCQPAVIHRNFKSANILVDNDL 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01595 69 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED 15 69 - -
Aip03g01595 69 ProSiteProfiles Protein kinase domain profile. 1 69 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g01595 69 PANTHER OS01G0253100 PROTEIN 15 69 IPR045271 GO:0004714|GO:0006468
Aip03g01595 69 SUPERFAMILY Protein kinase-like (PK-like) 17 68 IPR011009 -
Aip03g01595 69 Gene3D Transferase(Phosphotransferase) domain 1 6 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01595 Aip-Chr3 18493186 18494321 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01595 15 69 Strubbelig Receptor Gene Family AT4G03390 65.455 1.36e-21 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Aip03g01595 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01595 - - ahf:112737625 94.7449