Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01592 atggatctaagagCCTCCTGGGATTCTCCCAAACTCACTCGATCATGCTCAAACCTGGAAAGAAGGGATGTTCTCGGTAATACAATTCATCAATTCCCAGATTCAAAGTCGCAATCTTTCAAGAATTTACAGGAACTTACAGTAGGTAAAGTGGCTGCTAATCTTGAAAGCCCCAGGTCTGTGATGACTCACTGCAGTGCTGATAGAGTTATGTTGAGAAGGCATTCCTCAAGCCAAGTTCTTCCTTCTGGAAGTAAGAGACTCTGGTGGAAGATGTTTCTCTGGAGCCATAGGAACATACATAGACCTATTTCAAGCAAATCAACACAAGTGAATCCTGGTGTGGCTGTAACGCACAATCCATACGGGTACTCTTCCGACACCCTTGACCGAAGCACAAGCAGTCACCAGGAAATGTGGAATGAAGATAGACGAGAGGATATTTCGGCTCTTCAGGGTGTTCTAAGAGGCGGCGCAGAGGTGGCAGTGAAGCGAATATCACAAGAGAATGACGGCGTGAGAGAGTTCCTAGCAGAAATTTCAAGCCTTGGAAGATTGAAGCAGAGAAACTTGGTTGCTCTGAGAGGATGGTGCAAGAAAGACATGGGAAATTTCTTGTTAGTTTATGAATACATGGATAATGGGAGTTTGGATAAGAGAGTGTTTTGA 669 0.4365 MDLRASWDSPKLTRSCSNLERRDVLGNTIHQFPDSKSQSFKNLQELTVGKVAANLESPRSVMTHCSADRVMLRRHSSSQVLPSGSKRLWWKMFLWSHRNIHRPISSKSTQVNPGVAVTHNPYGYSSDTLDRSTSSHQEMWNEDRREDISALQGVLRGGAEVAVKRISQENDGVREFLAEISSLGRLKQRNLVALRGWCKKDMGNFLLVYEYMDNGSLDKRVF 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01592 222 Pfam Protein tyrosine and serine/threonine kinase 159 219 IPR001245 GO:0004672|GO:0006468
Aip03g01592 222 PANTHER OUTER ARM DYNEIN LIGHT CHAIN 1 PROTEIN 4 186 - -
Aip03g01592 222 SUPERFAMILY Protein kinase-like (PK-like) 152 220 IPR011009 -
Aip03g01592 222 PANTHER NISCHARIN RELATED 4 186 - -
Aip03g01592 222 Gene3D Phosphorylase Kinase; domain 1 149 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01592 Aip-Chr3 18196255 18198155 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01592 152 222 Receptor kinase-like Gene Family AT4G04960 72.603 1.23e-28 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aip03g01592 PK_Tyr_Ser-Thr 4.9e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01592 - - ahf:112762724 369.777