Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01591 ATGATGCTGAACTGTGAAGAGAGAATAAGAAATATCAAAGGTGTGGCCTTTGCTGTGTTGTATTTGCATGAAGGTTGGGAAGAACAAGTTCTGCATAGGGACATCAAAGCCAGCAATGTGTTACTTGATAAGGATATGAATGGAAAGCTTGGAGACTTTGGATTAGCAAGAATGCATAGCCATCGCCAAGTTGCTAGCACAACAAAGTTGGTTGGAACAGTTGGTTACATGGCTCCAGAAGTGATCAAGACCGGACAAGCCTCGACTCGCACGGATGTGTACATGTTTGGAATCTTGATTTTAGAGGTCATGTGTGGAAGGAGGCCTATGGAAGAAGGTAAGCCACCTCTTGTGGAGTTTGTGTGGGGACCAATGGTTAAAGGGGAACTAATGAATGCACTTGATGAGAGGTTAAGTGCTAAAGGAGACTTCAATCTGCAACAAGTTGAGAAGGTTCTTCAGTTGGGATTGTTGTGTGCATACCCTGAACCAAAATCAAGACCAAACATGAGACAAGTTGTGAGTATTTTAGAAGGGAACAATGAGGGAGGAGAAGAATCAGAGAATGAGAATGCGGATACTTGTTTGCTTCTAAAGTTGAAATCCGAGGATATTTTTTCTGAGTATTCTAATTATTTTAGCTATTCACACCCAACATTTGAAGATATTCGCCAGTCTAATACTTCTTCAATGTCTCTTACTTGGTCTAAATCTGTAGTTGAGGGTAGATGA 732 0.4112 MMLNCEERIRNIKGVAFAVLYLHEGWEEQVLHRDIKASNVLLDKDMNGKLGDFGLARMHSHRQVASTTKLVGTVGYMAPEVIKTGQASTRTDVYMFGILILEVMCGRRPMEEGKPPLVEFVWGPMVKGELMNALDERLSAKGDFNLQQVEKVLQLGLLCAYPEPKSRPNMRQVVSILEGNNEGGEESENENADTCLLLKLKSEDIFSEYSNYFSYSHPTFEDIRQSNTSSMSLTWSKSVVEGR 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01591 243 ProSiteProfiles Protein kinase domain profile. 1 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g01591 243 Gene3D Transferase(Phosphotransferase) domain 1 1 204 - -
Aip03g01591 243 ProSitePatterns Serine/Threonine protein kinases active-site signature. 30 42 IPR008271 GO:0004672|GO:0006468
Aip03g01591 243 PANTHER - 2 236 - -
Aip03g01591 243 SUPERFAMILY Protein kinase-like (PK-like) 3 178 IPR011009 -
Aip03g01591 243 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.1 2 236 - -
Aip03g01591 243 Pfam Protein kinase domain 12 174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g01591 243 SMART serkin_6 1 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01591 Aip-Chr3 18195514 18196245 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01591 3 180 Receptor kinase-like Gene Family AT5G59270 51.648 3.94e-60 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aip03g01591 Pkinase 7.6e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01591 - - ahf:112762724 454.907