Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01581 ATGTGCAAAGGTGCAGAAGAAAAAAAGCATGGTGGTGGTTTTTGTAGGAGCTTCACACATGAAGAGGGTGCATCATCACAACATCATCATCATGATGGTGGTTCAAAATCTTGTGAGCTATGTGGATTTCAAGCTTCATTGTATTGCCAAGCTGATGATGCTTATTTGTGTAGAGAGTGTGACAAATGGGTTCATAAGGCAAATTTCTTGGCACTTAGACACATAAGGTGTTTTTTGTGCAACACGTGTCACAATCTTACAAGGAGATGTCTCATTGGAGCTTCAATGGAGGTCATTCTTCCAGTCACATTAATTGAGAACCTTTCTAACAACAACAATAGCAGGGATTGTTCAAGAACACAAGACACCCCTTTCAAGTTTCTCTAA 387 0.3979 MCKGAEEKKHGGGFCRSFTHEEGASSQHHHHDGGSKSCELCGFQASLYCQADDAYLCRECDKWVHKANFLALRHIRCFLCNTCHNLTRRCLIGASMEVILPVTLIENLSNNNNSRDCSRTQDTPFKFL 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01581 128 CDD Bbox1_BBX-like 38 79 - -
Aip03g01581 128 PANTHER B-BOX ZINC FINGER PROTEIN 29 35 117 - -
Aip03g01581 128 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 35 117 - -
Aip03g01581 128 SMART bboxneu5 33 79 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01581 Aip-Chr3 17869588 17870179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01581 1 128 C2C2-CO-like Transcription Factor Family AT3G21890 41.791 2.77e-28 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aip03g01581 zf-B_box 1.6e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01581 - - gmx:100305571 158.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01581 03 17869588 17870179 Aip03g01581 03 17869588 17870179 ECH
Aip08g00785 08 7969633 7970373 Aip03g01581 03 17869588 17870179 PCT