Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01573 ATGGTTGAACGAAAGCAATTCAAGACAAGGTTATGTGTTCCTTATCAGAGAGGACGCTGCACGCGTCATAATTGCAACTTTGCGCATGGCAATGCTGAGTTGCGAAGGTTCTCTGCCACTTATAATGGTAGGAAAGACTTAGCCAATGACTTGAGGGATACACTAGACAGAAGGTATTTATCACCTCGAAGGCACTCGCCAACTCGAGATGGTAGAGGACACCAGGCCATTCATGAACACAGTCCGTCAAGATCCATGGAGAAAAAAAGTGACAGAAGACATTGGAGAAAACAGGGCATTACTGGCCAAAGTGATATTTCTGCAAGCTTGAAAGTCTCAGATAGAATTCAAGAACCGGTTAAAGAAGGAAAATTCGTTTCTTCTTGTTCTAGAAATACACTTGAGGAGCAGTTAAAGAAAGTACAGTTGGATATCAGGACTTTTGAGGACCGAAAATTCCAACTATCGGTTTACCTGGATGAGAGTGCTCAAGAAGTGGATAGCCTTAATTCTAGAATTCAGGAACTTGAAGCTCAGTTAGTTAAAGAGAATGAGGAGTGTAAAAGAATCAATTCTGGAATAAGGAAGTTTATCAGAGTGTACAATCATAATTCGCAGCTACAAGAAGAACTGAAGAGATCACAAGTCCGACTTCAAAGGCTTGGTGATCAACTTGTCTCGGATATTGCTAGAATTGGTGCTGAGGAAGAAGATCTAAGCATTGATATTGTAAGCAATGGTGAGAATAATAGTCATCCTCCAATCCCCAAACATAATGCCGAACAGAATGATGCATCTCCCCATGGAAAAAAGCTGCATGTGCATGCTGAGCAGGATGTATTGGAAGAGTTAAAACAAGATAGATCAAAAGTTGGGAATTCGGTTGAAACAAGAAGAAACAGGAAGCGATCTCGTTGGAATTTGCCTGCTCAATTGAATGACAAGGATAATGTAGGCCTTGAAACTCCAAACGATGGAACTGAAGATGCTAGGCCTTTAGATATTGAAAGCAAGCAGAAGAGAGGAAAGCTGAATTCTTCTGACAACCTTTCTTCAGAAAAGTTGAAGGAATTTAGGAATGAAGTGCCGTCAACAAGCATGGCAGCTCATGTGTTTGACGAGGAAGTTGAGATTGTATTTGATGACAGAATTGACCTCAACGAAATTGCACATACAGAAAATGACAATGAAGTGGCATTAGAGGTGAAGGGCGTACCCCTAATGCTTCCCCCAGCATTGATTCCCCATACCAATTATTCGCAGTACGAGGGGGACGACGAGAATGTGGACGTGGATGGTCTTGATGAAGGGGGAAATGTGGATATTGTCTGA 1332 0.4182 MVERKQFKTRLCVPYQRGRCTRHNCNFAHGNAELRRFSATYNGRKDLANDLRDTLDRRYLSPRRHSPTRDGRGHQAIHEHSPSRSMEKKSDRRHWRKQGITGQSDISASLKVSDRIQEPVKEGKFVSSCSRNTLEEQLKKVQLDIRTFEDRKFQLSVYLDESAQEVDSLNSRIQELEAQLVKENEECKRINSGIRKFIRVYNHNSQLQEELKRSQVRLQRLGDQLVSDIARIGAEEEDLSIDIVSNGENNSHPPIPKHNAEQNDASPHGKKLHVHAEQDVLEELKQDRSKVGNSVETRRNRKRSRWNLPAQLNDKDNVGLETPNDGTEDARPLDIESKQKRGKLNSSDNLSSEKLKEFRNEVPSTSMAAHVFDEEVEIVFDDRIDLNEIAHTENDNEVALEVKGVPLMLPPALIPHTNYSQYEGDDENVDVDGLDEGGNVDIV 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01573 443 Coils Coil 204 224 - -
Aip03g01573 443 MobiDBLite consensus disorder prediction 58 100 - -
Aip03g01573 443 Gene3D - 1 36 - -
Aip03g01573 443 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40 1 436 IPR045868 GO:0046872
Aip03g01573 443 MobiDBLite consensus disorder prediction 244 269 - -
Aip03g01573 443 MobiDBLite consensus disorder prediction 327 343 - -
Aip03g01573 443 MobiDBLite consensus disorder prediction 283 357 - -
Aip03g01573 443 Coils Coil 159 193 - -
Aip03g01573 443 MobiDBLite consensus disorder prediction 283 303 - -
Aip03g01573 443 MobiDBLite consensus disorder prediction 58 99 - -
Aip03g01573 443 ProSiteProfiles Zinc finger C3H1-type profile. 6 32 IPR000571 GO:0046872
Aip03g01573 443 Coils Coil 131 151 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Aip03g01573 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01573 - - adu:107477805 821.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01573 03 17800347 17807795 Aip03g01573 03 17800347 17807795 ECH