Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01567 ATGTCTGAATTCGACACTAACATCTCAACTGCTTTTGATCCCTTTGCTGAGGCAAATGCTGACGACTCAGGTGCTGGGGCAAAAGAGTATGTTCATGTGCGTATACAACAACGCAACGGAAGGAAAAGCCTGACAACTGTTCAAGGATTAAAGAAAGAATTCAGCTATACTAAGATACTCAAAGACCTGAAGAAAGAATTCTGCTGTAATGGTACTGTTGTACAGGACCCTGAGTTAGGCCAGGTCATACAGCTTCAGGGAGATCAAAGAAAGAACGTTTCAACTTTCCTTGTCCAAGCGGGCATAGTAAAGAAGGAGCATATCAAGATTCATGGTTTCTAA 342 0.4211 MSEFDTNISTAFDPFAEANADDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYTKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKIHGF 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01567 113 Pfam Translation initiation factor SUI1 28 102 IPR001950 GO:0003743|GO:0006413
Aip03g01567 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 113 - -
Aip03g01567 113 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 101 IPR001950 GO:0003743|GO:0006413
Aip03g01567 113 Gene3D - 1 113 - -
Aip03g01567 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 113 - -
Aip03g01567 113 CDD eIF1_SUI1 29 112 IPR005874 GO:0003743
Aip03g01567 113 PIRSF Transl_init_SUI1_Euk 1 113 IPR005874 GO:0003743
Aip03g01567 113 SUPERFAMILY eIF1-like 9 113 IPR036877 GO:0003743|GO:0006413
Aip03g01567 113 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 8 113 IPR005874 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01567 Aip-Chr3 17726330 17727531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01567 1 113 Eukaryotic Initiation Factors Gene Family AT4G27130 86.726 5.01e-73 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01567 K03113 - gmx:100784390 219.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01567 03 17726330 17727531 Aip03g01567 03 17726330 17727531 ECH