Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01537 ATGCCGAGACAAATCAACAAGGACAACGACGACGACAACAACAACCGTGAAGACAATTATAACGATGGAGTTGTAGCAAAAGAGGAGAATGGTGGTGGTGAAAAGAGTTTGAGAGGGAAAACAAAGAAAGGGCCATGGACACTTTCGGAAGATATAATGTTGAGAGAGTATGTGATGAAGTACGGTGAAGGGAATTGGAACTGTGTGCAAAAGAATTCAGGGTTGGCAAGGTGTGGCAAAAGTTGTAGGCTTAGATGGGCCAATCATCTAAGACCTAATTTGAAGAAAGGTTCATTTTCTAAAGAAGAAGAAGATTTAATTGTTCAACTTCATGCTAAGCTTGGAAACAAATGGGCTCGAATGGCCGCACAGCTACCTGGGAGAACAGATAATGAAATAAAAAACTTTTGGAACACTAGAGTAAAAAGATGCCAAAGAGCTGGGTTGCCACTTTATCCACCACAAGTGTTGCATGAAGCCAATGTATACCATCTACAACAACATCTCAAACCTCAACCTTCTTCATCATCATCATCATCTTTCTCATTTTCTCCATTATTTATGTCTTCCTCTAACCACCAAGAAATCAATCAACTAAAGCTAATAGCCCACCCTTCTACAAATCAACAAAACCCACCCCATTCCTCTTGTTTATCAAATAATAATCCACAACCATACCCACAATTCAAGTTTCCAAATGAAAACCCTAATATTACAAATAGTGGAAATTTAGGGTTCCCATTATCTCCTATTTCCATAACTTCCTCTTTGTTTCACCAAAGCTATAATAATGTAAATAATAGCTCAAATAATGATTACCATTTAGGAAGCTATAACTATGGGTTCCACTCCAACAATAGTGATACTAATAATAATAACATTAATAATAATAATGTTAAAATAATGCCAAATTCACCATTTGAAGCACTTCCTCCTTTGATTCAAGGTTCAAATAATAATAATGAAGCCTCTTTAAGCCAATCATCACCACCACTTAGCTCAACAACACCTACTTCATCTCATGCTAGCGGTAATAATGGCTACTTAATAGGAGGAGGAGCTTCAAACATGGCTACAAATGGTGACGGCGGCCGCTCCGGAGTTGCGCCACTTTCGCCGCCTCAAGAAAATGGTGGTGGTGGCTTGTTGGGTGCAGTTTTGGTAGAAGCTCAAAGTCTTTGTAACAATAATGACAAGTCTAAGAGTGATAATGAGGATTCAACTGCATCACAGGTTTTATCTCATAAAAGAAAATACATAGTAACTACTGAGGAATGTGCAAAAGAAGAAGAGACTAATAATGTGGTTGTGGAGTCAGATACCAAAAGCAATGGAAATACCATTAATAAAATACACAAGGTTGATTTGTACTCTTCTCCATTTTCAACAGGGAATAAACAAACAACTGAGGATGAATTGGAGGAAATCAATACCATGGATGATGACTTATTTGGCCTACTTAAAAACTTTCAAGAAATGCCAGTTCCAGATTGGTACCACAAAAGAGGACAACCATTGGAACTTGAAACTCAACAAGATGCTTCATTGGGCCCCATAGATCAAGCATTTTCAGCTCATGACAGTTTTTGGAGAAACATGCCCAAATATTGA 1611 0.3793 MPRQINKDNDDDNNNREDNYNDGVVAKEENGGGEKSLRGKTKKGPWTLSEDIMLREYVMKYGEGNWNCVQKNSGLARCGKSCRLRWANHLRPNLKKGSFSKEEEDLIVQLHAKLGNKWARMAAQLPGRTDNEIKNFWNTRVKRCQRAGLPLYPPQVLHEANVYHLQQHLKPQPSSSSSSSFSFSPLFMSSSNHQEINQLKLIAHPSTNQQNPPHSSCLSNNNPQPYPQFKFPNENPNITNSGNLGFPLSPISITSSLFHQSYNNVNNSSNNDYHLGSYNYGFHSNNSDTNNNNINNNNVKIMPNSPFEALPPLIQGSNNNNEASLSQSSPPLSSTTPTSSHASGNNGYLIGGGASNMATNGDGGRSGVAPLSPPQENGGGGLLGAVLVEAQSLCNNNDKSKSDNEDSTASQVLSHKRKYIVTTEECAKEEETNNVVVESDTKSNGNTINKIHKVDLYSSPFSTGNKQTTEDELEEINTMDDDLFGLLKNFQEMPVPDWYHKRGQPLELETQQDASLGPIDQAFSAHDSFWRNMPKY 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01537 536 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 38 90 IPR017930 -
Aip03g01537 536 MobiDBLite consensus disorder prediction 311 353 - -
Aip03g01537 536 Gene3D - 42 95 - -
Aip03g01537 536 ProSiteProfiles Myb-like domain profile. 91 141 IPR001005 -
Aip03g01537 536 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 24 508 - -
Aip03g01537 536 MobiDBLite consensus disorder prediction 1 43 - -
Aip03g01537 536 Gene3D - 98 144 - -
Aip03g01537 536 SUPERFAMILY Homeodomain-like 42 137 IPR009057 -
Aip03g01537 536 ProSiteProfiles Myb-like domain profile. 38 90 IPR001005 -
Aip03g01537 536 SMART sant 95 143 IPR001005 -
Aip03g01537 536 SMART sant 42 92 IPR001005 -
Aip03g01537 536 Pfam Myb-like DNA-binding domain 96 139 IPR001005 -
Aip03g01537 536 Pfam Myb-like DNA-binding domain 43 90 IPR001005 -
Aip03g01537 536 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 91 145 IPR017930 -
Aip03g01537 536 CDD SANT 45 90 IPR001005 -
Aip03g01537 536 MobiDBLite consensus disorder prediction 306 382 - -
Aip03g01537 536 CDD SANT 98 139 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01537 Aip-Chr3 16982132 16984957 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01537 26 309 MYB Transcription Factor Family AT4G26930 45.172 4.93e-65 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aip03g01537 Myb_DNA-binding 2.8e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01537 K09422 - gmx:100784779 356.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01537 03 16982132 16984957 Aip03g01537 03 16982132 16984957 ECH