Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01531 ATGATCCATGGATTCTTCAAAATTAAGGATGTATTGTATTGCACTCGTATCTTTCAAAGAGTATTTAAGCCAAGGGAATTGGAGTTCTTGATCCTTATATCAGACAAGGCATATACAAGGAATGAAGTTCTGGATATGGAGAAGTTGATGCTGAACACATTGCACTTTAACATGTCTGTTCCAACAGCATATGTTTTCATTAGAAGCTTCCTAAAGGCAGCACAAGCAGACAGAAAGAAGGCTGGGTCAGGGAAACTTATAGGGGTGCATCGGAAGTACTGTTCTTCAAAGCACAACTACACTGCAAAATGTGAAGAAGCAAGTTTTCTTCTTGATAACTCATTGTTGTAG 351 0.3846 MIHGFFKIKDVLYCTRIFQRVFKPRELEFLILISDKAYTRNEVLDMEKLMLNTLHFNMSVPTAYVFIRSFLKAAQADRKKAGSGKLIGVHRKYCSSKHNYTAKCEEASFLLDNSLL 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01531 116 Gene3D - 54 81 - -
Aip03g01531 116 Pfam Cyclin, N-terminal domain 24 59 IPR006671 -
Aip03g01531 116 SUPERFAMILY Cyclin-like 38 75 IPR036915 -
Aip03g01531 116 PANTHER CYCLINS 78 110 IPR039361 -
Aip03g01531 116 PANTHER CYCLINS 29 77 IPR039361 -
Aip03g01531 116 Gene3D - 8 53 - -
Aip03g01531 116 PANTHER CYCLIN-B2-1 78 110 - -
Aip03g01531 116 PANTHER CYCLIN-B2-1 29 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01531 Aip-Chr3 16859440 16860036 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01531 30 79 Core Cell Cycle Gene Families AT1G76310 76.000 3.03e-20 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01531 K21777 - oeu:111387421 88.5817