Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01521 ATGGTAGAGGCTGGAGACGTCAGATCTGCTTTCTCCAGCCACTACCATTACTCTCTTCGAACTTTACGGAACTCAAGGACTGCAACTGCACATCTCGGCAACGATTCGAGATTGACCAAAATGTTCACTTCAAGGAAGAAAATCCACAAGGATAATGATGCTGAACCCACTGAGTTTGAGGAGACAGTTGCACAGTACGTGTTTGATTTGGAGAACACTAATCAGGACCTGAAAAGTGATTTGAAAGATCTTTACATAAACCAGGCAATTCAAATGGACGTGGCTGGGAATCGCAAGGCTGTGGTCATCTATGTTCCTTTCAGATTGAGGAAGTCGTTCCGCAAAATTCATCTTCGTCTTGTCAGGGAGCTTGAGAAGAAGTTTAGTGGGAAGGATGTTGTGTTGATCGCCACAAGAAGGATCGTGCGTCCTCCAAAGAAAGGGTCTGCTGTTCAGCGGCCCCGTACCCGCACTTTGACTGCTGTGCATGATGCTATTCTTGAAGACGTAGTTTATCCTGCCGAGATTGTTGGCAAACGAGTCAGATACAGACTCGACGGATCAAAAATAATCAAAGTTTTCTTGGATCCGAAGGAACGCAACAACACTGAATACAAGCTGGAGGCTTTCTCTGGAGTTTACAGGAAGCTTACCGGAAAAGATGTATCTTTTGAGTTTCCAATCACAGATGCCTAG 696 0.4511 MVEAGDVRSAFSSHYHYSLRTLRNSRTATAHLGNDSRLTKMFTSRKKIHKDNDAEPTEFEETVAQYVFDLENTNQDLKSDLKDLYINQAIQMDVAGNRKAVVIYVPFRLRKSFRKIHLRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRTRTLTAVHDAILEDVVYPAEIVGKRVRYRLDGSKIIKVFLDPKERNNTEYKLEAFSGVYRKLTGKDVSFEFPITDA 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01521 231 Pfam Ribosomal protein S7e 47 226 IPR000554 GO:0003735|GO:0005840|GO:0006412
Aip03g01521 231 PANTHER 40S RIBOSOMAL PROTEIN S7 26 230 IPR000554 GO:0003735|GO:0005840|GO:0006412
Aip03g01521 231 ProSitePatterns Ribosomal protein S7e signature. 119 132 IPR000554 GO:0003735|GO:0005840|GO:0006412
Aip03g01521 231 PANTHER 40S RIBOSOMAL PROTEIN S7 26 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01521 Aip-Chr3 16647936 16652210 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01521 41 231 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 77.487 2.49e-112 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01521 K02993 - gmx:100500684 358.221