Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01518 ATGGCTACTATATATACACTTCTTCTTGTGTTCTCAAACAACACAAATCAATTGCATCTCCTCAAGTATCAGTACTCACATATTTCTCTCAATCAAATCCTCCAAGAACAATCTATTTCTTTTTCTTTTGAACAACAAGAAGAAACAATGGCATTCCGCATTCTAGGTATTAGAAAGGCATCACTTTCTGCATCAAAAGGGACTAATGTTCCAAAAGGCTATCTTGCAGTCTATGTAGGAGATAAGATGAGGCGGTTTGTGATTCCTGTATGTTACTTGAACCAGCCTTCATTTCAAGGATTACTAAACCAAGCAGAAGAAGAATTCGGATATGATCATCCAACTGGTGGTCTCACAATTCCATGCTGTGAGGATGAGTTCTTAAATCTCACTTCTCAGTTGGGTGTCCAATAA 414 0.3768 MATIYTLLLVFSNNTNQLHLLKYQYSHISLNQILQEQSISFSFEQQEETMAFRILGIRKASLSASKGTNVPKGYLAVYVGDKMRRFVIPVCYLNQPSFQGLLNQAEEEFGYDHPTGGLTIPCCEDEFLNLTSQLGVQ 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01518 137 Pfam Auxin responsive protein 53 132 IPR003676 GO:0009733
Aip03g01518 137 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 60 135 IPR003676 GO:0009733
Aip03g01518 137 PANTHER AUXIN-INDUCED PROTEIN 10A5 60 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01518 Aip-Chr3 16553649 16554194 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01518 63 122 Calmodulin-binding Proteins AT3G43120 56.667 7.33e-19 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01518 K14488 - gmx:100786095 138.272