Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01517 ATGGGTTTTCGTTTAGCTGGTATCAGAAGAAAGCTATCATTTAATTCAAACCAAGCATCTTCAAAGGCTTTGGAAGTCCCAAAAGGCTATCTTGCTGTCTATGTTGGAGAGAATATGAAGCGGTTCGTGATTCCCATTTCGTATTTGAACCAGACATCATTTCAAGAATTACTAAGCCAAGCAGAAGAAGAATTCGGATATGATCATCCAATGGGTGGTCTCACTATTCCATGCAGTGAGGAAACCTTCTTGGACCTCACTTCTTGCTTCAACTGA 276 0.4058 MGFRLAGIRRKLSFNSNQASSKALEVPKGYLAVYVGENMKRFVIPISYLNQTSFQELLSQAEEEFGYDHPMGGLTIPCSEETFLDLTSCFN 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01517 91 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 91 IPR003676 GO:0009733
Aip03g01517 91 Pfam Auxin responsive protein 9 88 IPR003676 GO:0009733
Aip03g01517 91 PANTHER AUXIN-INDUCED PROTEIN 10A5 1 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01517 Aip-Chr3 16552326 16552858 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01517 18 90 Calmodulin-binding Proteins AT3G43120 52.055 7.83e-22 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01517 K14488 - aip:110269930 177.948